Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX11Q96FC9 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
DDX11Q96FC9 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.69■□□□□ 0.9
DDX11Q96FC9 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
DDX11Q96FC9 AC009533.2-201ENST00000543664 586 ntBASIC20.69■□□□□ 0.9
DDX11Q96FC9 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.69■□□□□ 0.9
DDX11Q96FC9 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX11Q96FC9 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC20.69■□□□□ 0.9
DDX11Q96FC9 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
DDX11Q96FC9 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX11Q96FC9 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX11Q96FC9 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX11Q96FC9 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.69■□□□□ 0.9
DDX11Q96FC9 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
DDX11Q96FC9 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX11Q96FC9 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX11Q96FC9 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.69■□□□□ 0.9
DDX11Q96FC9 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
DDX11Q96FC9 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.68■□□□□ 0.9
DDX11Q96FC9 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
DDX11Q96FC9 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
DDX11Q96FC9 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.68■□□□□ 0.9
DDX11Q96FC9 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DDX11Q96FC9 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DDX11Q96FC9 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DDX11Q96FC9 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.68■□□□□ 0.9
DDX11Q96FC9 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
DDX11Q96FC9 AL031284.1-201ENST00000419297 478 ntBASIC20.68■□□□□ 0.9
DDX11Q96FC9 DDX43P3-201ENST00000441064 443 ntBASIC20.68■□□□□ 0.9
DDX11Q96FC9 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.68■□□□□ 0.9
DDX11Q96FC9 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DDX11Q96FC9 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.68■□□□□ 0.9
DDX11Q96FC9 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20.68■□□□□ 0.9
DDX11Q96FC9 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DDX11Q96FC9 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
DDX11Q96FC9 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DDX11Q96FC9 PCDHA12-202ENST00000613593 2588 ntBASIC20.68■□□□□ 0.9
DDX11Q96FC9 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.68■□□□□ 0.9
DDX11Q96FC9 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DDX11Q96FC9 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX11Q96FC9 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX11Q96FC9 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.67■□□□□ 0.9
DDX11Q96FC9 SIRPAP1-201ENST00000448467 1770 ntBASIC20.67■□□□□ 0.9
DDX11Q96FC9 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
DDX11Q96FC9 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX11Q96FC9 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.67■□□□□ 0.9
DDX11Q96FC9 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.67■□□□□ 0.9
DDX11Q96FC9 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
DDX11Q96FC9 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
DDX11Q96FC9 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX11Q96FC9 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX11Q96FC9 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX11Q96FC9 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX11Q96FC9 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX11Q96FC9 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX11Q96FC9 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.67■□□□□ 0.9
DDX11Q96FC9 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.67■□□□□ 0.9
DDX11Q96FC9 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
DDX11Q96FC9 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.67■□□□□ 0.9
DDX11Q96FC9 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.67■□□□□ 0.9
DDX11Q96FC9 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.67■□□□□ 0.9
DDX11Q96FC9 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.67■□□□□ 0.9
DDX11Q96FC9 AC023511.2-201ENST00000618803 211 ntBASIC20.67■□□□□ 0.9
DDX11Q96FC9 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
DDX11Q96FC9 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.67■□□□□ 0.9
DDX11Q96FC9 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
DDX11Q96FC9 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.67■□□□□ 0.9
DDX11Q96FC9 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX11Q96FC9 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
DDX11Q96FC9 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.67■□□□□ 0.9
DDX11Q96FC9 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
DDX11Q96FC9 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
DDX11Q96FC9 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC20.66■□□□□ 0.9
DDX11Q96FC9 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDX11Q96FC9 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.66■□□□□ 0.9
DDX11Q96FC9 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.66■□□□□ 0.9
DDX11Q96FC9 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.66■□□□□ 0.9
DDX11Q96FC9 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.66■□□□□ 0.9
DDX11Q96FC9 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.66■□□□□ 0.9
DDX11Q96FC9 AC093909.1-201ENST00000504731 1122 ntBASIC20.66■□□□□ 0.9
DDX11Q96FC9 RNA5SP419-201ENST00000515908 135 ntBASIC20.66■□□□□ 0.9
DDX11Q96FC9 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.66■□□□□ 0.9
DDX11Q96FC9 AC148477.8-201ENST00000624298 468 ntBASIC20.66■□□□□ 0.9
DDX11Q96FC9 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.66■□□□□ 0.9
DDX11Q96FC9 AF228730.7-201ENST00000641842 219 ntBASIC20.66■□□□□ 0.9
DDX11Q96FC9 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDX11Q96FC9 IL9RP2-201ENST00000423948 1312 ntBASIC20.66■□□□□ 0.9
DDX11Q96FC9 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.66■□□□□ 0.9
DDX11Q96FC9 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDX11Q96FC9 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
DDX11Q96FC9 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.66■□□□□ 0.9
DDX11Q96FC9 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDX11Q96FC9 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDX11Q96FC9 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.66■□□□□ 0.9
DDX11Q96FC9 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
DDX11Q96FC9 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.66■□□□□ 0.9
DDX11Q96FC9 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
DDX11Q96FC9 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
DDX11Q96FC9 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
DDX11Q96FC9 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms