Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SHC3Q92529 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SHC3Q92529 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.55■□□□□ 0.56
SHC3Q92529 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.55■□□□□ 0.56
SHC3Q92529 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.55■□□□□ 0.56
SHC3Q92529 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SHC3Q92529 MIR3652-201ENST00000579335 131 ntBASIC18.55■□□□□ 0.56
SHC3Q92529 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SHC3Q92529 AP001269.4-201ENST00000609611 512 ntBASIC18.55■□□□□ 0.56
SHC3Q92529 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.55■□□□□ 0.56
SHC3Q92529 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SHC3Q92529 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SHC3Q92529 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SHC3Q92529 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.55■□□□□ 0.56
SHC3Q92529 AC079776.2-201ENST00000641154 1609 ntBASIC18.55■□□□□ 0.56
SHC3Q92529 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SHC3Q92529 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SHC3Q92529 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SHC3Q92529 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SHC3Q92529 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.55■□□□□ 0.56
SHC3Q92529 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SHC3Q92529 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHC3Q92529 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHC3Q92529 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHC3Q92529 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SHC3Q92529 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHC3Q92529 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SHC3Q92529 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.54■□□□□ 0.56
SHC3Q92529 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.54■□□□□ 0.56
SHC3Q92529 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
SHC3Q92529 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SHC3Q92529 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.54■□□□□ 0.56
SHC3Q92529 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SHC3Q92529 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHC3Q92529 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHC3Q92529 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SHC3Q92529 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.54■□□□□ 0.56
SHC3Q92529 AC132008.2-207ENST00000454517 770 ntBASIC18.54■□□□□ 0.56
SHC3Q92529 SIGLEC30P-201ENST00000455569 941 ntBASIC18.54■□□□□ 0.56
SHC3Q92529 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
SHC3Q92529 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SHC3Q92529 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.54■□□□□ 0.56
SHC3Q92529 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SHC3Q92529 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.54■□□□□ 0.56
SHC3Q92529 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHC3Q92529 AP005117.1-201ENST00000584346 1413 ntBASIC18.54■□□□□ 0.56
SHC3Q92529 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SHC3Q92529 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.54■□□□□ 0.56
SHC3Q92529 AC090340.1-201ENST00000620778 4980 ntBASIC18.54■□□□□ 0.56
SHC3Q92529 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.54■□□□□ 0.56
SHC3Q92529 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SHC3Q92529 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHC3Q92529 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHC3Q92529 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHC3Q92529 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SHC3Q92529 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHC3Q92529 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
SHC3Q92529 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SHC3Q92529 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SHC3Q92529 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHC3Q92529 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHC3Q92529 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHC3Q92529 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHC3Q92529 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SHC3Q92529 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHC3Q92529 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
SHC3Q92529 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.53■□□□□ 0.56
SHC3Q92529 AC106795.1-205ENST00000512851 1056 ntBASIC18.53■□□□□ 0.56
SHC3Q92529 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.53■□□□□ 0.56
SHC3Q92529 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.53■□□□□ 0.56
SHC3Q92529 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.53■□□□□ 0.56
SHC3Q92529 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.53■□□□□ 0.56
SHC3Q92529 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SHC3Q92529 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.53■□□□□ 0.56
SHC3Q92529 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
SHC3Q92529 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHC3Q92529 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SHC3Q92529 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SHC3Q92529 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHC3Q92529 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SHC3Q92529 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHC3Q92529 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.53■□□□□ 0.56
SHC3Q92529 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SHC3Q92529 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.53■□□□□ 0.56
SHC3Q92529 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SHC3Q92529 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SHC3Q92529 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SHC3Q92529 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.52■□□□□ 0.56
SHC3Q92529 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SHC3Q92529 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
SHC3Q92529 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SHC3Q92529 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SHC3Q92529 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SHC3Q92529 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SHC3Q92529 AC004817.3-201ENST00000602957 2129 ntBASIC18.52■□□□□ 0.56
SHC3Q92529 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
SHC3Q92529 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SHC3Q92529 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
SHC3Q92529 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SHC3Q92529 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms