Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC22.67■■□□□ 1.22
RAPGEF4Q8WZA2 AC099522.2-201ENST00000607001 744 ntBASIC22.67■■□□□ 1.22
RAPGEF4Q8WZA2 BSG-214ENST00000614867 960 ntTSL 3 BASIC22.67■■□□□ 1.22
RAPGEF4Q8WZA2 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC22.67■■□□□ 1.22
RAPGEF4Q8WZA2 AL645728.2-201ENST00000641974 660 ntBASIC22.67■■□□□ 1.22
RAPGEF4Q8WZA2 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
RAPGEF4Q8WZA2 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RAPGEF4Q8WZA2 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
RAPGEF4Q8WZA2 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
RAPGEF4Q8WZA2 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC22.67■■□□□ 1.22
RAPGEF4Q8WZA2 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC22.67■■□□□ 1.22
RAPGEF4Q8WZA2 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
RAPGEF4Q8WZA2 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RAPGEF4Q8WZA2 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
RAPGEF4Q8WZA2 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
RAPGEF4Q8WZA2 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RAPGEF4Q8WZA2 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC22.66■■□□□ 1.22
RAPGEF4Q8WZA2 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC22.66■■□□□ 1.22
RAPGEF4Q8WZA2 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RAPGEF4Q8WZA2 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC22.66■■□□□ 1.22
RAPGEF4Q8WZA2 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RAPGEF4Q8WZA2 HLA-DRB6-201ENST00000411500 1235 ntBASIC22.66■■□□□ 1.22
RAPGEF4Q8WZA2 AL671277.1-201ENST00000429656 993 ntBASIC22.66■■□□□ 1.22
RAPGEF4Q8WZA2 AC140658.5-201ENST00000438532 169 ntBASIC22.66■■□□□ 1.22
RAPGEF4Q8WZA2 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC22.66■■□□□ 1.22
RAPGEF4Q8WZA2 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
RAPGEF4Q8WZA2 FAM86C2P-203ENST00000528684 1004 ntBASIC22.66■■□□□ 1.22
RAPGEF4Q8WZA2 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
RAPGEF4Q8WZA2 LINC01451-201ENST00000623792 534 ntBASIC22.66■■□□□ 1.22
RAPGEF4Q8WZA2 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC22.66■■□□□ 1.22
RAPGEF4Q8WZA2 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC22.66■■□□□ 1.22
RAPGEF4Q8WZA2 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RAPGEF4Q8WZA2 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RAPGEF4Q8WZA2 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RAPGEF4Q8WZA2 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC22.65■■□□□ 1.22
RAPGEF4Q8WZA2 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC22.65■■□□□ 1.22
RAPGEF4Q8WZA2 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
RAPGEF4Q8WZA2 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
RAPGEF4Q8WZA2 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RAPGEF4Q8WZA2 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC22.65■■□□□ 1.22
RAPGEF4Q8WZA2 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC22.65■■□□□ 1.22
RAPGEF4Q8WZA2 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RAPGEF4Q8WZA2 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RAPGEF4Q8WZA2 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
RAPGEF4Q8WZA2 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RAPGEF4Q8WZA2 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
RAPGEF4Q8WZA2 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RAPGEF4Q8WZA2 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
RAPGEF4Q8WZA2 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RAPGEF4Q8WZA2 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RAPGEF4Q8WZA2 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RAPGEF4Q8WZA2 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC22.65■■□□□ 1.22
RAPGEF4Q8WZA2 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC22.65■■□□□ 1.22
RAPGEF4Q8WZA2 FAM86GP-201ENST00000448322 971 ntBASIC22.65■■□□□ 1.22
RAPGEF4Q8WZA2 AC107918.2-201ENST00000530817 355 ntBASIC22.65■■□□□ 1.22
RAPGEF4Q8WZA2 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RAPGEF4Q8WZA2 AC009093.7-201ENST00000623853 1223 ntBASIC22.65■■□□□ 1.22
RAPGEF4Q8WZA2 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RAPGEF4Q8WZA2 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC22.65■■□□□ 1.22
RAPGEF4Q8WZA2 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RAPGEF4Q8WZA2 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC22.65■■□□□ 1.22
RAPGEF4Q8WZA2 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RAPGEF4Q8WZA2 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
RAPGEF4Q8WZA2 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RAPGEF4Q8WZA2 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RAPGEF4Q8WZA2 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC22.64■■□□□ 1.22
RAPGEF4Q8WZA2 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RAPGEF4Q8WZA2 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
RAPGEF4Q8WZA2 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RAPGEF4Q8WZA2 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RAPGEF4Q8WZA2 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC22.64■■□□□ 1.21
RAPGEF4Q8WZA2 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
RAPGEF4Q8WZA2 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC22.64■■□□□ 1.21
RAPGEF4Q8WZA2 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
RAPGEF4Q8WZA2 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC22.64■■□□□ 1.21
RAPGEF4Q8WZA2 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC22.64■■□□□ 1.21
RAPGEF4Q8WZA2 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
RAPGEF4Q8WZA2 KRT8P48-201ENST00000515599 1220 ntBASIC22.64■■□□□ 1.21
RAPGEF4Q8WZA2 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
RAPGEF4Q8WZA2 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC22.64■■□□□ 1.21
RAPGEF4Q8WZA2 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC22.64■■□□□ 1.21
RAPGEF4Q8WZA2 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RAPGEF4Q8WZA2 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RAPGEF4Q8WZA2 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RAPGEF4Q8WZA2 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC22.64■■□□□ 1.21
RAPGEF4Q8WZA2 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC22.64■■□□□ 1.21
RAPGEF4Q8WZA2 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC22.64■■□□□ 1.21
RAPGEF4Q8WZA2 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RAPGEF4Q8WZA2 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC22.64■■□□□ 1.21
RAPGEF4Q8WZA2 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RAPGEF4Q8WZA2 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
RAPGEF4Q8WZA2 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RAPGEF4Q8WZA2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RAPGEF4Q8WZA2 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RAPGEF4Q8WZA2 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC22.63■■□□□ 1.21
RAPGEF4Q8WZA2 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
RAPGEF4Q8WZA2 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RAPGEF4Q8WZA2 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
RAPGEF4Q8WZA2 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RAPGEF4Q8WZA2 SPDYE11-202ENST00000450699 704 ntBASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms