Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHD5Q8TDI0 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CHD5Q8TDI0 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CHD5Q8TDI0 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.49■□□□□ 0.39
CHD5Q8TDI0 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.49■□□□□ 0.39
CHD5Q8TDI0 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.49■□□□□ 0.39
CHD5Q8TDI0 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHD5Q8TDI0 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHD5Q8TDI0 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.49■□□□□ 0.39
CHD5Q8TDI0 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHD5Q8TDI0 RPS2P28-201ENST00000314255 741 ntBASIC17.49■□□□□ 0.39
CHD5Q8TDI0 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.49■□□□□ 0.39
CHD5Q8TDI0 AL590627.1-203ENST00000421194 1026 ntBASIC17.49■□□□□ 0.39
CHD5Q8TDI0 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHD5Q8TDI0 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.49■□□□□ 0.39
CHD5Q8TDI0 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CHD5Q8TDI0 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.49■□□□□ 0.39
CHD5Q8TDI0 KRT18P58-201ENST00000527480 1120 ntBASIC17.49■□□□□ 0.39
CHD5Q8TDI0 AC107918.2-201ENST00000530817 355 ntBASIC17.49■□□□□ 0.39
CHD5Q8TDI0 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.49■□□□□ 0.39
CHD5Q8TDI0 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.49■□□□□ 0.39
CHD5Q8TDI0 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHD5Q8TDI0 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.49■□□□□ 0.39
CHD5Q8TDI0 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHD5Q8TDI0 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.49■□□□□ 0.39
CHD5Q8TDI0 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.49■□□□□ 0.39
CHD5Q8TDI0 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CHD5Q8TDI0 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CHD5Q8TDI0 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CHD5Q8TDI0 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.49■□□□□ 0.39
CHD5Q8TDI0 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHD5Q8TDI0 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.48■□□□□ 0.39
CHD5Q8TDI0 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHD5Q8TDI0 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.48■□□□□ 0.39
CHD5Q8TDI0 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHD5Q8TDI0 REXO1L3P-201ENST00000622202 1288 ntBASIC17.48■□□□□ 0.39
CHD5Q8TDI0 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CHD5Q8TDI0 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHD5Q8TDI0 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHD5Q8TDI0 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHD5Q8TDI0 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.48■□□□□ 0.39
CHD5Q8TDI0 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHD5Q8TDI0 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHD5Q8TDI0 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHD5Q8TDI0 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHD5Q8TDI0 CRYGEP-201ENST00000412192 528 ntBASIC17.48■□□□□ 0.39
CHD5Q8TDI0 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.48■□□□□ 0.39
CHD5Q8TDI0 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.48■□□□□ 0.39
CHD5Q8TDI0 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.48■□□□□ 0.39
CHD5Q8TDI0 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHD5Q8TDI0 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.47■□□□□ 0.39
CHD5Q8TDI0 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.47■□□□□ 0.39
CHD5Q8TDI0 AC002310.6-201ENST00000624451 1377 ntBASIC17.47■□□□□ 0.39
CHD5Q8TDI0 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHD5Q8TDI0 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CHD5Q8TDI0 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHD5Q8TDI0 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CHD5Q8TDI0 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHD5Q8TDI0 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.47■□□□□ 0.39
CHD5Q8TDI0 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CHD5Q8TDI0 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
CHD5Q8TDI0 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.47■□□□□ 0.39
CHD5Q8TDI0 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHD5Q8TDI0 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.47■□□□□ 0.39
CHD5Q8TDI0 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CHD5Q8TDI0 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHD5Q8TDI0 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHD5Q8TDI0 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHD5Q8TDI0 IGHV3-65-201ENST00000523210 341 ntBASIC17.47■□□□□ 0.39
CHD5Q8TDI0 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.47■□□□□ 0.39
CHD5Q8TDI0 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CHD5Q8TDI0 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHD5Q8TDI0 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHD5Q8TDI0 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHD5Q8TDI0 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHD5Q8TDI0 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHD5Q8TDI0 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHD5Q8TDI0 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHD5Q8TDI0 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
CHD5Q8TDI0 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.46■□□□□ 0.39
CHD5Q8TDI0 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHD5Q8TDI0 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHD5Q8TDI0 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHD5Q8TDI0 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.46■□□□□ 0.39
CHD5Q8TDI0 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.46■□□□□ 0.39
CHD5Q8TDI0 AC093909.1-201ENST00000504731 1122 ntBASIC17.46■□□□□ 0.39
CHD5Q8TDI0 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.46■□□□□ 0.39
CHD5Q8TDI0 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.46■□□□□ 0.39
CHD5Q8TDI0 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.46■□□□□ 0.39
CHD5Q8TDI0 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.46■□□□□ 0.39
CHD5Q8TDI0 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.46■□□□□ 0.39
CHD5Q8TDI0 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.46■□□□□ 0.39
CHD5Q8TDI0 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHD5Q8TDI0 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.46■□□□□ 0.39
CHD5Q8TDI0 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.46■□□□□ 0.39
CHD5Q8TDI0 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHD5Q8TDI0 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.46■□□□□ 0.39
CHD5Q8TDI0 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHD5Q8TDI0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHD5Q8TDI0 SLC25A6P2-201ENST00000497974 877 ntBASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms