Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMARCC2Q8TAQ2 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SMARCC2Q8TAQ2 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.39■□□□□ 0.85
SMARCC2Q8TAQ2 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMARCC2Q8TAQ2 INTS4P1-201ENST00000438455 1935 ntBASIC20.39■□□□□ 0.85
SMARCC2Q8TAQ2 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
SMARCC2Q8TAQ2 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCC2Q8TAQ2 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCC2Q8TAQ2 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCC2Q8TAQ2 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCC2Q8TAQ2 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SMARCC2Q8TAQ2 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCC2Q8TAQ2 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCC2Q8TAQ2 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCC2Q8TAQ2 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCC2Q8TAQ2 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCC2Q8TAQ2 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.38■□□□□ 0.85
SMARCC2Q8TAQ2 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCC2Q8TAQ2 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCC2Q8TAQ2 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCC2Q8TAQ2 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCC2Q8TAQ2 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.38■□□□□ 0.85
SMARCC2Q8TAQ2 AKR1C7P-201ENST00000305623 895 ntBASIC20.38■□□□□ 0.85
SMARCC2Q8TAQ2 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.38■□□□□ 0.85
SMARCC2Q8TAQ2 MYCLP1-201ENST00000372451 1075 ntBASIC20.38■□□□□ 0.85
SMARCC2Q8TAQ2 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
SMARCC2Q8TAQ2 AC132008.2-207ENST00000454517 770 ntBASIC20.38■□□□□ 0.85
SMARCC2Q8TAQ2 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.38■□□□□ 0.85
SMARCC2Q8TAQ2 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.38■□□□□ 0.85
SMARCC2Q8TAQ2 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCC2Q8TAQ2 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCC2Q8TAQ2 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCC2Q8TAQ2 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCC2Q8TAQ2 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
SMARCC2Q8TAQ2 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.38■□□□□ 0.85
SMARCC2Q8TAQ2 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC20.38■□□□□ 0.85
SMARCC2Q8TAQ2 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCC2Q8TAQ2 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCC2Q8TAQ2 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCC2Q8TAQ2 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.38■□□□□ 0.85
SMARCC2Q8TAQ2 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMARCC2Q8TAQ2 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMARCC2Q8TAQ2 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMARCC2Q8TAQ2 KRT8P10-201ENST00000450021 1447 ntBASIC20.37■□□□□ 0.85
SMARCC2Q8TAQ2 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.37■□□□□ 0.85
SMARCC2Q8TAQ2 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.37■□□□□ 0.85
SMARCC2Q8TAQ2 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SMARCC2Q8TAQ2 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMARCC2Q8TAQ2 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMARCC2Q8TAQ2 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SMARCC2Q8TAQ2 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SMARCC2Q8TAQ2 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMARCC2Q8TAQ2 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
SMARCC2Q8TAQ2 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
SMARCC2Q8TAQ2 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMARCC2Q8TAQ2 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SMARCC2Q8TAQ2 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SMARCC2Q8TAQ2 FAM220CP-201ENST00000395253 831 ntBASIC20.37■□□□□ 0.85
SMARCC2Q8TAQ2 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.37■□□□□ 0.85
SMARCC2Q8TAQ2 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.37■□□□□ 0.85
SMARCC2Q8TAQ2 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.37■□□□□ 0.85
SMARCC2Q8TAQ2 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
SMARCC2Q8TAQ2 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.37■□□□□ 0.85
SMARCC2Q8TAQ2 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.37■□□□□ 0.85
SMARCC2Q8TAQ2 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.37■□□□□ 0.85
SMARCC2Q8TAQ2 REXO1L6P-202ENST00000619970 1078 ntBASIC20.37■□□□□ 0.85
SMARCC2Q8TAQ2 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.37■□□□□ 0.85
SMARCC2Q8TAQ2 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SMARCC2Q8TAQ2 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.37■□□□□ 0.85
SMARCC2Q8TAQ2 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
SMARCC2Q8TAQ2 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMARCC2Q8TAQ2 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.37■□□□□ 0.85
SMARCC2Q8TAQ2 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMARCC2Q8TAQ2 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.37■□□□□ 0.85
SMARCC2Q8TAQ2 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.37■□□□□ 0.85
SMARCC2Q8TAQ2 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMARCC2Q8TAQ2 AL353593.2-201ENST00000602529 1483 ntBASIC20.37■□□□□ 0.85
SMARCC2Q8TAQ2 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMARCC2Q8TAQ2 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMARCC2Q8TAQ2 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SMARCC2Q8TAQ2 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
SMARCC2Q8TAQ2 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMARCC2Q8TAQ2 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SMARCC2Q8TAQ2 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMARCC2Q8TAQ2 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.36■□□□□ 0.85
SMARCC2Q8TAQ2 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMARCC2Q8TAQ2 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMARCC2Q8TAQ2 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMARCC2Q8TAQ2 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMARCC2Q8TAQ2 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.36■□□□□ 0.85
SMARCC2Q8TAQ2 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMARCC2Q8TAQ2 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.36■□□□□ 0.85
SMARCC2Q8TAQ2 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMARCC2Q8TAQ2 AC026396.1-201ENST00000419388 421 ntBASIC20.36■□□□□ 0.85
SMARCC2Q8TAQ2 AC103564.2-201ENST00000432853 1299 ntBASIC20.36■□□□□ 0.85
SMARCC2Q8TAQ2 SAPCD2P3-201ENST00000455031 850 ntBASIC20.36■□□□□ 0.85
SMARCC2Q8TAQ2 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMARCC2Q8TAQ2 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
SMARCC2Q8TAQ2 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.36■□□□□ 0.85
SMARCC2Q8TAQ2 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms