Protein–RNA interactions for Protein: Q8N1L1

LINC00528, Putative uncharacterized protein encoded by LINC00528, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00528Q8N1L1 AC012317.2-201ENST00000623305 2251 ntBASIC11.65□□□□□ -0.54
LINC00528Q8N1L1 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC11.65□□□□□ -0.54
LINC00528Q8N1L1 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
LINC00528Q8N1L1 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC00528Q8N1L1 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC00528Q8N1L1 AC007618.1-201ENST00000366455 732 ntBASIC11.65□□□□□ -0.54
LINC00528Q8N1L1 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
LINC00528Q8N1L1 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC00528Q8N1L1 MIR662-201ENST00000384847 95 ntBASIC11.65□□□□□ -0.54
LINC00528Q8N1L1 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
LINC00528Q8N1L1 KRT18P23-201ENST00000435622 1283 ntBASIC11.65□□□□□ -0.54
LINC00528Q8N1L1 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC11.65□□□□□ -0.54
LINC00528Q8N1L1 AC098483.1-201ENST00000438623 955 ntTSL 5 BASIC11.65□□□□□ -0.54
LINC00528Q8N1L1 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC11.65□□□□□ -0.54
LINC00528Q8N1L1 EMBP1-201ENST00000458200 901 ntBASIC11.65□□□□□ -0.54
LINC00528Q8N1L1 FOSL1P1-201ENST00000511041 816 ntBASIC11.65□□□□□ -0.54
LINC00528Q8N1L1 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC11.65□□□□□ -0.54
LINC00528Q8N1L1 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
LINC00528Q8N1L1 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
LINC00528Q8N1L1 MEG8-208ENST00000553465 1176 ntTSL 5 BASIC11.65□□□□□ -0.54
LINC00528Q8N1L1 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC11.65□□□□□ -0.54
LINC00528Q8N1L1 TPSP2-201ENST00000561760 610 ntBASIC11.65□□□□□ -0.54
LINC00528Q8N1L1 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
LINC00528Q8N1L1 AC114878.2-201ENST00000604863 1251 ntBASIC11.65□□□□□ -0.54
LINC00528Q8N1L1 AC010976.1-201ENST00000631170 734 ntTSL 5 BASIC11.65□□□□□ -0.54
LINC00528Q8N1L1 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC00528Q8N1L1 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC00528Q8N1L1 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC11.65□□□□□ -0.54
LINC00528Q8N1L1 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC11.65□□□□□ -0.54
LINC00528Q8N1L1 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
LINC00528Q8N1L1 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC11.65□□□□□ -0.54
LINC00528Q8N1L1 AC008556.1-201ENST00000610908 2040 ntBASIC11.65□□□□□ -0.54
LINC00528Q8N1L1 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC00528Q8N1L1 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC00528Q8N1L1 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC00528Q8N1L1 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
LINC00528Q8N1L1 AP000941.1-201ENST00000530198 1388 ntTSL 3 BASIC11.65□□□□□ -0.55
LINC00528Q8N1L1 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
LINC00528Q8N1L1 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.55
LINC00528Q8N1L1 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
LINC00528Q8N1L1 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
LINC00528Q8N1L1 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
LINC00528Q8N1L1 REXO1L9P-201ENST00000604264 2108 ntBASIC11.65□□□□□ -0.55
LINC00528Q8N1L1 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
LINC00528Q8N1L1 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
LINC00528Q8N1L1 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
LINC00528Q8N1L1 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 UBC-206ENST00000538617 1303 ntTSL 5 BASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 ZNF626-201ENST00000291750 1123 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 BAALC-202ENST00000306391 243 ntTSL 5 BASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 BAALC-204ENST00000330955 222 ntTSL 5 BASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 NSL1-201ENST00000366976 722 ntTSL 2 BASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 BMS1P13-201ENST00000417301 885 ntBASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 AC034187.1-201ENST00000437047 561 ntTSL 4 BASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 AC131097.1-201ENST00000437438 739 ntTSL 3 BASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 DRAXINP1-201ENST00000437611 948 ntBASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 BMS1P11-201ENST00000442351 885 ntBASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 BMS1P9-201ENST00000457640 885 ntBASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 AC108729.1-201ENST00000487812 947 ntBASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 AC104819.1-201ENST00000504587 486 ntBASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 AC012615.1-201ENST00000565797 1299 ntBASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 ZNF92P2-201ENST00000600543 1059 ntBASIC11.64□□□□□ -0.55
LINC00528Q8N1L1 AC112503.2-201ENST00000609005 552 ntBASIC11.64□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms