Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.95■□□□□ 0.46
NPAS3Q8IXF0 REXO1L3P-201ENST00000622202 1288 ntBASIC17.95■□□□□ 0.46
NPAS3Q8IXF0 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS3Q8IXF0 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS3Q8IXF0 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS3Q8IXF0 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS3Q8IXF0 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.95■□□□□ 0.46
NPAS3Q8IXF0 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
NPAS3Q8IXF0 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS3Q8IXF0 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.95■□□□□ 0.46
NPAS3Q8IXF0 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.95■□□□□ 0.46
NPAS3Q8IXF0 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.95■□□□□ 0.46
NPAS3Q8IXF0 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.95■□□□□ 0.46
NPAS3Q8IXF0 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPAS3Q8IXF0 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPAS3Q8IXF0 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPAS3Q8IXF0 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.94■□□□□ 0.46
NPAS3Q8IXF0 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.94■□□□□ 0.46
NPAS3Q8IXF0 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPAS3Q8IXF0 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NPAS3Q8IXF0 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.94■□□□□ 0.46
NPAS3Q8IXF0 AL135999.2-201ENST00000622438 1686 ntBASIC17.94■□□□□ 0.46
NPAS3Q8IXF0 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPAS3Q8IXF0 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.94■□□□□ 0.46
NPAS3Q8IXF0 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPAS3Q8IXF0 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPAS3Q8IXF0 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
NPAS3Q8IXF0 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NPAS3Q8IXF0 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.94■□□□□ 0.46
NPAS3Q8IXF0 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
NPAS3Q8IXF0 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.94■□□□□ 0.46
NPAS3Q8IXF0 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.94■□□□□ 0.46
NPAS3Q8IXF0 AC092364.2-202ENST00000597012 1073 ntBASIC17.94■□□□□ 0.46
NPAS3Q8IXF0 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPAS3Q8IXF0 AC006116.8-202ENST00000587620 1550 ntBASIC17.94■□□□□ 0.46
NPAS3Q8IXF0 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPAS3Q8IXF0 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.94■□□□□ 0.46
NPAS3Q8IXF0 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.94■□□□□ 0.46
NPAS3Q8IXF0 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NPAS3Q8IXF0 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NPAS3Q8IXF0 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.94■□□□□ 0.46
NPAS3Q8IXF0 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS3Q8IXF0 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS3Q8IXF0 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
NPAS3Q8IXF0 AC046185.3-201ENST00000623228 1824 ntBASIC17.93■□□□□ 0.46
NPAS3Q8IXF0 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.93■□□□□ 0.46
NPAS3Q8IXF0 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS3Q8IXF0 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS3Q8IXF0 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
NPAS3Q8IXF0 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS3Q8IXF0 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS3Q8IXF0 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
NPAS3Q8IXF0 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS3Q8IXF0 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS3Q8IXF0 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
NPAS3Q8IXF0 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
NPAS3Q8IXF0 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS3Q8IXF0 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS3Q8IXF0 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS3Q8IXF0 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.93■□□□□ 0.46
NPAS3Q8IXF0 AC011467.4-201ENST00000594891 528 ntBASIC17.93■□□□□ 0.46
NPAS3Q8IXF0 AC022145.2-201ENST00000598203 171 ntBASIC17.93■□□□□ 0.46
NPAS3Q8IXF0 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
NPAS3Q8IXF0 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
NPAS3Q8IXF0 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS3Q8IXF0 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS3Q8IXF0 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPAS3Q8IXF0 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
NPAS3Q8IXF0 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.93■□□□□ 0.46
NPAS3Q8IXF0 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
NPAS3Q8IXF0 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.93■□□□□ 0.46
NPAS3Q8IXF0 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS3Q8IXF0 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS3Q8IXF0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
NPAS3Q8IXF0 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS3Q8IXF0 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS3Q8IXF0 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS3Q8IXF0 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS3Q8IXF0 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS3Q8IXF0 AL121761.2-201ENST00000598007 1648 ntBASIC17.92■□□□□ 0.46
NPAS3Q8IXF0 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS3Q8IXF0 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS3Q8IXF0 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS3Q8IXF0 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.92■□□□□ 0.46
NPAS3Q8IXF0 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.92■□□□□ 0.46
NPAS3Q8IXF0 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS3Q8IXF0 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
NPAS3Q8IXF0 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.92■□□□□ 0.46
NPAS3Q8IXF0 PAWRP1-201ENST00000451083 565 ntBASIC17.92■□□□□ 0.46
NPAS3Q8IXF0 AL513480.1-201ENST00000451731 511 ntBASIC17.92■□□□□ 0.46
NPAS3Q8IXF0 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.92■□□□□ 0.46
NPAS3Q8IXF0 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.92■□□□□ 0.46
NPAS3Q8IXF0 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.92■□□□□ 0.46
NPAS3Q8IXF0 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS3Q8IXF0 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.92■□□□□ 0.46
NPAS3Q8IXF0 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPAS3Q8IXF0 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.92■□□□□ 0.46
NPAS3Q8IXF0 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
NPAS3Q8IXF0 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.92■□□□□ 0.46
NPAS3Q8IXF0 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms