Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRIM48Q8IWZ4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM48Q8IWZ4 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM48Q8IWZ4 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM48Q8IWZ4 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM48Q8IWZ4 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM48Q8IWZ4 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM48Q8IWZ4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM48Q8IWZ4 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM48Q8IWZ4 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
TRIM48Q8IWZ4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.12■□□□□ 0.33
TRIM48Q8IWZ4 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.12■□□□□ 0.33
TRIM48Q8IWZ4 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM48Q8IWZ4 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM48Q8IWZ4 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM48Q8IWZ4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM48Q8IWZ4 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TRIM48Q8IWZ4 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM48Q8IWZ4 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TRIM48Q8IWZ4 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM48Q8IWZ4 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM48Q8IWZ4 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRIM48Q8IWZ4 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM48Q8IWZ4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM48Q8IWZ4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM48Q8IWZ4 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM48Q8IWZ4 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM48Q8IWZ4 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
TRIM48Q8IWZ4 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TRIM48Q8IWZ4 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM48Q8IWZ4 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRIM48Q8IWZ4 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRIM48Q8IWZ4 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRIM48Q8IWZ4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.11■□□□□ 0.33
TRIM48Q8IWZ4 AL590627.1-203ENST00000421194 1026 ntBASIC17.11■□□□□ 0.33
TRIM48Q8IWZ4 RPS2P1-201ENST00000434010 821 ntBASIC17.11■□□□□ 0.33
TRIM48Q8IWZ4 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM48Q8IWZ4 OR7E14P-202ENST00000530490 1290 ntBASIC17.11■□□□□ 0.33
TRIM48Q8IWZ4 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TRIM48Q8IWZ4 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.11■□□□□ 0.33
TRIM48Q8IWZ4 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM48Q8IWZ4 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM48Q8IWZ4 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM48Q8IWZ4 AL022326.1-202ENST00000641533 845 ntBASIC17.11■□□□□ 0.33
TRIM48Q8IWZ4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.11■□□□□ 0.33
TRIM48Q8IWZ4 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM48Q8IWZ4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM48Q8IWZ4 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM48Q8IWZ4 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM48Q8IWZ4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM48Q8IWZ4 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
TRIM48Q8IWZ4 AC139713.2-201ENST00000641328 2723 ntBASIC17.11■□□□□ 0.33
TRIM48Q8IWZ4 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM48Q8IWZ4 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM48Q8IWZ4 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.11■□□□□ 0.33
TRIM48Q8IWZ4 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM48Q8IWZ4 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM48Q8IWZ4 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM48Q8IWZ4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.1■□□□□ 0.33
TRIM48Q8IWZ4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
TRIM48Q8IWZ4 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM48Q8IWZ4 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRIM48Q8IWZ4 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM48Q8IWZ4 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM48Q8IWZ4 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM48Q8IWZ4 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM48Q8IWZ4 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
TRIM48Q8IWZ4 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM48Q8IWZ4 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM48Q8IWZ4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TRIM48Q8IWZ4 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM48Q8IWZ4 AC003669.1-201ENST00000334569 611 ntBASIC17.1■□□□□ 0.33
TRIM48Q8IWZ4 AL022342.1-201ENST00000400363 863 ntBASIC17.1■□□□□ 0.33
TRIM48Q8IWZ4 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM48Q8IWZ4 SPDYE21P-201ENST00000413323 827 ntBASIC17.1■□□□□ 0.33
TRIM48Q8IWZ4 AL020989.1-201ENST00000422979 469 ntBASIC17.1■□□□□ 0.33
TRIM48Q8IWZ4 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM48Q8IWZ4 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM48Q8IWZ4 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.1■□□□□ 0.33
TRIM48Q8IWZ4 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.1■□□□□ 0.33
TRIM48Q8IWZ4 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.1■□□□□ 0.33
TRIM48Q8IWZ4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM48Q8IWZ4 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM48Q8IWZ4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TRIM48Q8IWZ4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM48Q8IWZ4 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM48Q8IWZ4 AL353593.2-201ENST00000602529 1483 ntBASIC17.1■□□□□ 0.33
TRIM48Q8IWZ4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRIM48Q8IWZ4 AL049757.1-201ENST00000616842 1596 ntBASIC17.1■□□□□ 0.33
TRIM48Q8IWZ4 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM48Q8IWZ4 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.1■□□□□ 0.33
TRIM48Q8IWZ4 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM48Q8IWZ4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM48Q8IWZ4 AL354751.1-201ENST00000412768 1863 ntBASIC17.1■□□□□ 0.33
TRIM48Q8IWZ4 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms