Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF135Q8IUD6 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF135Q8IUD6 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF135Q8IUD6 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
RNF135Q8IUD6 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF135Q8IUD6 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF135Q8IUD6 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF135Q8IUD6 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF135Q8IUD6 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF135Q8IUD6 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF135Q8IUD6 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF135Q8IUD6 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.46■□□□□ 0.55
RNF135Q8IUD6 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF135Q8IUD6 VN2R19P-201ENST00000442399 1052 ntBASIC18.46■□□□□ 0.55
RNF135Q8IUD6 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF135Q8IUD6 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.46■□□□□ 0.55
RNF135Q8IUD6 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF135Q8IUD6 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF135Q8IUD6 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
RNF135Q8IUD6 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF135Q8IUD6 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF135Q8IUD6 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF135Q8IUD6 AC004817.3-201ENST00000602957 2129 ntBASIC18.46■□□□□ 0.55
RNF135Q8IUD6 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
RNF135Q8IUD6 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
RNF135Q8IUD6 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
RNF135Q8IUD6 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF135Q8IUD6 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF135Q8IUD6 PHGDH-209ENST00000641074 1780 ntBASIC18.45■□□□□ 0.54
RNF135Q8IUD6 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF135Q8IUD6 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF135Q8IUD6 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF135Q8IUD6 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF135Q8IUD6 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF135Q8IUD6 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF135Q8IUD6 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.45■□□□□ 0.54
RNF135Q8IUD6 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.45■□□□□ 0.54
RNF135Q8IUD6 AC190387.1-201ENST00000551683 408 ntBASIC18.45■□□□□ 0.54
RNF135Q8IUD6 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.45■□□□□ 0.54
RNF135Q8IUD6 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
RNF135Q8IUD6 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.45■□□□□ 0.54
RNF135Q8IUD6 MIR4745-201ENST00000577608 62 ntBASIC18.45■□□□□ 0.54
RNF135Q8IUD6 MIR4751-201ENST00000578027 74 ntBASIC18.45■□□□□ 0.54
RNF135Q8IUD6 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RNF135Q8IUD6 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.45■□□□□ 0.54
RNF135Q8IUD6 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF135Q8IUD6 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF135Q8IUD6 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF135Q8IUD6 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF135Q8IUD6 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF135Q8IUD6 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
RNF135Q8IUD6 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.45■□□□□ 0.54
RNF135Q8IUD6 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF135Q8IUD6 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF135Q8IUD6 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
RNF135Q8IUD6 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
RNF135Q8IUD6 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF135Q8IUD6 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF135Q8IUD6 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
RNF135Q8IUD6 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF135Q8IUD6 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF135Q8IUD6 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF135Q8IUD6 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF135Q8IUD6 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF135Q8IUD6 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF135Q8IUD6 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.44■□□□□ 0.54
RNF135Q8IUD6 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF135Q8IUD6 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF135Q8IUD6 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF135Q8IUD6 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.44■□□□□ 0.54
RNF135Q8IUD6 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF135Q8IUD6 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF135Q8IUD6 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.44■□□□□ 0.54
RNF135Q8IUD6 HCG4B-203ENST00000450128 991 ntBASIC18.44■□□□□ 0.54
RNF135Q8IUD6 PRYP5-201ENST00000451909 266 ntBASIC18.44■□□□□ 0.54
RNF135Q8IUD6 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.44■□□□□ 0.54
RNF135Q8IUD6 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.44■□□□□ 0.54
RNF135Q8IUD6 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.44■□□□□ 0.54
RNF135Q8IUD6 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
RNF135Q8IUD6 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF135Q8IUD6 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
RNF135Q8IUD6 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
RNF135Q8IUD6 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF135Q8IUD6 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF135Q8IUD6 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF135Q8IUD6 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF135Q8IUD6 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF135Q8IUD6 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF135Q8IUD6 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
RNF135Q8IUD6 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF135Q8IUD6 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
RNF135Q8IUD6 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF135Q8IUD6 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF135Q8IUD6 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF135Q8IUD6 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
RNF135Q8IUD6 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF135Q8IUD6 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.43■□□□□ 0.54
RNF135Q8IUD6 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF135Q8IUD6 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RNF135Q8IUD6 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms