Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB11FIP4Q86YS3 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB11FIP4Q86YS3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB11FIP4Q86YS3 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
RAB11FIP4Q86YS3 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
RAB11FIP4Q86YS3 KLF4P1-201ENST00000412782 1185 ntBASIC20.43■□□□□ 0.86
RAB11FIP4Q86YS3 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.43■□□□□ 0.86
RAB11FIP4Q86YS3 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.43■□□□□ 0.86
RAB11FIP4Q86YS3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB11FIP4Q86YS3 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.43■□□□□ 0.86
RAB11FIP4Q86YS3 AF238378.1-201ENST00000526806 358 ntBASIC20.43■□□□□ 0.86
RAB11FIP4Q86YS3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RAB11FIP4Q86YS3 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RAB11FIP4Q86YS3 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RAB11FIP4Q86YS3 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB11FIP4Q86YS3 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
RAB11FIP4Q86YS3 AC046185.3-201ENST00000623228 1824 ntBASIC20.43■□□□□ 0.86
RAB11FIP4Q86YS3 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.43■□□□□ 0.86
RAB11FIP4Q86YS3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB11FIP4Q86YS3 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.43■□□□□ 0.86
RAB11FIP4Q86YS3 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB11FIP4Q86YS3 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RAB11FIP4Q86YS3 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB11FIP4Q86YS3 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RAB11FIP4Q86YS3 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB11FIP4Q86YS3 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.42■□□□□ 0.86
RAB11FIP4Q86YS3 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
RAB11FIP4Q86YS3 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB11FIP4Q86YS3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RAB11FIP4Q86YS3 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RAB11FIP4Q86YS3 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB11FIP4Q86YS3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RAB11FIP4Q86YS3 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RAB11FIP4Q86YS3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.42■□□□□ 0.86
RAB11FIP4Q86YS3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.42■□□□□ 0.86
RAB11FIP4Q86YS3 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB11FIP4Q86YS3 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.42■□□□□ 0.86
RAB11FIP4Q86YS3 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.42■□□□□ 0.86
RAB11FIP4Q86YS3 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB11FIP4Q86YS3 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB11FIP4Q86YS3 STK19B-204ENST00000512515 211 ntBASIC20.42■□□□□ 0.86
RAB11FIP4Q86YS3 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.42■□□□□ 0.86
RAB11FIP4Q86YS3 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.42■□□□□ 0.86
RAB11FIP4Q86YS3 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RAB11FIP4Q86YS3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.42■□□□□ 0.86
RAB11FIP4Q86YS3 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.42■□□□□ 0.86
RAB11FIP4Q86YS3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RAB11FIP4Q86YS3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
RAB11FIP4Q86YS3 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.42■□□□□ 0.86
RAB11FIP4Q86YS3 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
RAB11FIP4Q86YS3 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB11FIP4Q86YS3 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
RAB11FIP4Q86YS3 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RAB11FIP4Q86YS3 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.42■□□□□ 0.86
RAB11FIP4Q86YS3 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RAB11FIP4Q86YS3 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB11FIP4Q86YS3 AP005117.1-201ENST00000584346 1413 ntBASIC20.42■□□□□ 0.86
RAB11FIP4Q86YS3 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RAB11FIP4Q86YS3 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB11FIP4Q86YS3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB11FIP4Q86YS3 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB11FIP4Q86YS3 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB11FIP4Q86YS3 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RAB11FIP4Q86YS3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
RAB11FIP4Q86YS3 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB11FIP4Q86YS3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB11FIP4Q86YS3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RAB11FIP4Q86YS3 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB11FIP4Q86YS3 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.41■□□□□ 0.86
RAB11FIP4Q86YS3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB11FIP4Q86YS3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
RAB11FIP4Q86YS3 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
RAB11FIP4Q86YS3 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RAB11FIP4Q86YS3 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RAB11FIP4Q86YS3 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB11FIP4Q86YS3 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RAB11FIP4Q86YS3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.41■□□□□ 0.86
RAB11FIP4Q86YS3 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.41■□□□□ 0.86
RAB11FIP4Q86YS3 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RAB11FIP4Q86YS3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB11FIP4Q86YS3 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.41■□□□□ 0.86
RAB11FIP4Q86YS3 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RAB11FIP4Q86YS3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.41■□□□□ 0.86
RAB11FIP4Q86YS3 MTDHP3-201ENST00000594186 672 ntBASIC20.41■□□□□ 0.86
RAB11FIP4Q86YS3 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.41■□□□□ 0.86
RAB11FIP4Q86YS3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB11FIP4Q86YS3 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB11FIP4Q86YS3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.41■□□□□ 0.86
RAB11FIP4Q86YS3 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RAB11FIP4Q86YS3 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB11FIP4Q86YS3 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB11FIP4Q86YS3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RAB11FIP4Q86YS3 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB11FIP4Q86YS3 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
RAB11FIP4Q86YS3 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB11FIP4Q86YS3 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RAB11FIP4Q86YS3 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB11FIP4Q86YS3 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB11FIP4Q86YS3 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.4■□□□□ 0.86
RAB11FIP4Q86YS3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms