Protein–RNA interactions for Protein: Q86WT1

TTC30A, Tetratricopeptide repeat protein 30A, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC30AQ86WT1 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TTC30AQ86WT1 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.47■□□□□ 0.55
TTC30AQ86WT1 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TTC30AQ86WT1 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TTC30AQ86WT1 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TTC30AQ86WT1 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TTC30AQ86WT1 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TTC30AQ86WT1 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TTC30AQ86WT1 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.47■□□□□ 0.55
TTC30AQ86WT1 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TTC30AQ86WT1 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TTC30AQ86WT1 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.47■□□□□ 0.55
TTC30AQ86WT1 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TTC30AQ86WT1 AL020989.1-201ENST00000422979 469 ntBASIC18.47■□□□□ 0.55
TTC30AQ86WT1 BX005266.1-201ENST00000473402 457 ntBASIC18.47■□□□□ 0.55
TTC30AQ86WT1 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.47■□□□□ 0.55
TTC30AQ86WT1 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TTC30AQ86WT1 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
TTC30AQ86WT1 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TTC30AQ86WT1 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.47■□□□□ 0.55
TTC30AQ86WT1 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.47■□□□□ 0.55
TTC30AQ86WT1 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TTC30AQ86WT1 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TTC30AQ86WT1 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.47■□□□□ 0.55
TTC30AQ86WT1 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TTC30AQ86WT1 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.47■□□□□ 0.55
TTC30AQ86WT1 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TTC30AQ86WT1 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.47■□□□□ 0.55
TTC30AQ86WT1 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
TTC30AQ86WT1 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TTC30AQ86WT1 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TTC30AQ86WT1 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TTC30AQ86WT1 AC046185.3-201ENST00000623228 1824 ntBASIC18.46■□□□□ 0.55
TTC30AQ86WT1 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TTC30AQ86WT1 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
TTC30AQ86WT1 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TTC30AQ86WT1 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TTC30AQ86WT1 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TTC30AQ86WT1 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TTC30AQ86WT1 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TTC30AQ86WT1 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TTC30AQ86WT1 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TTC30AQ86WT1 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
TTC30AQ86WT1 AC020916.1-201ENST00000587762 1774 ntBASIC18.46■□□□□ 0.55
TTC30AQ86WT1 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TTC30AQ86WT1 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.46■□□□□ 0.55
TTC30AQ86WT1 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.46■□□□□ 0.55
TTC30AQ86WT1 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.46■□□□□ 0.55
TTC30AQ86WT1 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.46■□□□□ 0.55
TTC30AQ86WT1 AL139288.1-201ENST00000623748 933 ntBASIC18.46■□□□□ 0.55
TTC30AQ86WT1 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.46■□□□□ 0.55
TTC30AQ86WT1 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.46■□□□□ 0.55
TTC30AQ86WT1 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TTC30AQ86WT1 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.46■□□□□ 0.55
TTC30AQ86WT1 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TTC30AQ86WT1 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.46■□□□□ 0.55
TTC30AQ86WT1 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TTC30AQ86WT1 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.46■□□□□ 0.55
TTC30AQ86WT1 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TTC30AQ86WT1 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TTC30AQ86WT1 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.46■□□□□ 0.55
TTC30AQ86WT1 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.46■□□□□ 0.55
TTC30AQ86WT1 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TTC30AQ86WT1 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
TTC30AQ86WT1 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
TTC30AQ86WT1 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
TTC30AQ86WT1 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
TTC30AQ86WT1 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.45■□□□□ 0.54
TTC30AQ86WT1 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TTC30AQ86WT1 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
TTC30AQ86WT1 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TTC30AQ86WT1 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TTC30AQ86WT1 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TTC30AQ86WT1 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
TTC30AQ86WT1 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.45■□□□□ 0.54
TTC30AQ86WT1 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TTC30AQ86WT1 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TTC30AQ86WT1 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TTC30AQ86WT1 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.45■□□□□ 0.54
TTC30AQ86WT1 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.45■□□□□ 0.54
TTC30AQ86WT1 FAM197Y8-203ENST00000450145 560 ntBASIC18.45■□□□□ 0.54
TTC30AQ86WT1 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TTC30AQ86WT1 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TTC30AQ86WT1 AC064862.7-201ENST00000604520 867 ntBASIC18.45■□□□□ 0.54
TTC30AQ86WT1 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TTC30AQ86WT1 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TTC30AQ86WT1 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.45■□□□□ 0.54
TTC30AQ86WT1 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TTC30AQ86WT1 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TTC30AQ86WT1 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TTC30AQ86WT1 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TTC30AQ86WT1 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TTC30AQ86WT1 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TTC30AQ86WT1 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.44■□□□□ 0.54
TTC30AQ86WT1 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TTC30AQ86WT1 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TTC30AQ86WT1 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.44■□□□□ 0.54
TTC30AQ86WT1 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TTC30AQ86WT1 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TTC30AQ86WT1 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms