Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LDB1Q86U70 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.39■□□□□ 0.37
LDB1Q86U70 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
LDB1Q86U70 AC103564.2-201ENST00000432853 1299 ntBASIC17.39■□□□□ 0.37
LDB1Q86U70 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.39■□□□□ 0.37
LDB1Q86U70 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.39■□□□□ 0.37
LDB1Q86U70 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.39■□□□□ 0.37
LDB1Q86U70 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LDB1Q86U70 AC046185.3-201ENST00000623228 1824 ntBASIC17.39■□□□□ 0.37
LDB1Q86U70 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LDB1Q86U70 AC009053.2-201ENST00000563701 2365 ntBASIC17.39■□□□□ 0.37
LDB1Q86U70 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LDB1Q86U70 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.39■□□□□ 0.37
LDB1Q86U70 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
LDB1Q86U70 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LDB1Q86U70 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LDB1Q86U70 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LDB1Q86U70 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LDB1Q86U70 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.38■□□□□ 0.37
LDB1Q86U70 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LDB1Q86U70 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LDB1Q86U70 AC132938.5-201ENST00000624980 1813 ntBASIC17.38■□□□□ 0.37
LDB1Q86U70 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.38■□□□□ 0.37
LDB1Q86U70 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
LDB1Q86U70 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LDB1Q86U70 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LDB1Q86U70 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.38■□□□□ 0.37
LDB1Q86U70 NUS1P2-201ENST00000417358 873 ntBASIC17.38■□□□□ 0.37
LDB1Q86U70 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.38■□□□□ 0.37
LDB1Q86U70 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.38■□□□□ 0.37
LDB1Q86U70 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.38■□□□□ 0.37
LDB1Q86U70 AC111152.3-201ENST00000569699 673 ntBASIC17.38■□□□□ 0.37
LDB1Q86U70 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.38■□□□□ 0.37
LDB1Q86U70 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.38■□□□□ 0.37
LDB1Q86U70 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
LDB1Q86U70 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LDB1Q86U70 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.38■□□□□ 0.37
LDB1Q86U70 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
LDB1Q86U70 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.38■□□□□ 0.37
LDB1Q86U70 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LDB1Q86U70 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LDB1Q86U70 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LDB1Q86U70 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LDB1Q86U70 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.38■□□□□ 0.37
LDB1Q86U70 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LDB1Q86U70 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LDB1Q86U70 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LDB1Q86U70 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
LDB1Q86U70 AL353593.2-201ENST00000602529 1483 ntBASIC17.37■□□□□ 0.37
LDB1Q86U70 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LDB1Q86U70 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
LDB1Q86U70 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LDB1Q86U70 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
LDB1Q86U70 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LDB1Q86U70 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.37■□□□□ 0.37
LDB1Q86U70 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LDB1Q86U70 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.37■□□□□ 0.37
LDB1Q86U70 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
LDB1Q86U70 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.37■□□□□ 0.37
LDB1Q86U70 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LDB1Q86U70 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LDB1Q86U70 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.37■□□□□ 0.37
LDB1Q86U70 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
LDB1Q86U70 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.37■□□□□ 0.37
LDB1Q86U70 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
LDB1Q86U70 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.37■□□□□ 0.37
LDB1Q86U70 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.37■□□□□ 0.37
LDB1Q86U70 AC012615.1-201ENST00000565797 1299 ntBASIC17.37■□□□□ 0.37
LDB1Q86U70 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
LDB1Q86U70 STK25P1-201ENST00000585406 838 ntBASIC17.37■□□□□ 0.37
LDB1Q86U70 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.37■□□□□ 0.37
LDB1Q86U70 AC138894.3-201ENST00000603787 634 ntBASIC17.37■□□□□ 0.37
LDB1Q86U70 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LDB1Q86U70 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
LDB1Q86U70 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LDB1Q86U70 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LDB1Q86U70 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
LDB1Q86U70 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LDB1Q86U70 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LDB1Q86U70 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.37■□□□□ 0.37
LDB1Q86U70 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LDB1Q86U70 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
LDB1Q86U70 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LDB1Q86U70 AC016396.2-201ENST00000562575 1417 ntBASIC17.37■□□□□ 0.37
LDB1Q86U70 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LDB1Q86U70 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LDB1Q86U70 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LDB1Q86U70 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LDB1Q86U70 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.37■□□□□ 0.37
LDB1Q86U70 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
LDB1Q86U70 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LDB1Q86U70 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LDB1Q86U70 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LDB1Q86U70 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
LDB1Q86U70 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
LDB1Q86U70 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.36■□□□□ 0.37
LDB1Q86U70 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.36■□□□□ 0.37
LDB1Q86U70 AC116353.5-201ENST00000638148 1699 ntBASIC17.36■□□□□ 0.37
LDB1Q86U70 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LDB1Q86U70 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms