Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TUBA1AQ71U36 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TUBA1AQ71U36 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TUBA1AQ71U36 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TUBA1AQ71U36 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TUBA1AQ71U36 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TUBA1AQ71U36 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
TUBA1AQ71U36 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.13■□□□□ 0.17
TUBA1AQ71U36 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TUBA1AQ71U36 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TUBA1AQ71U36 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TUBA1AQ71U36 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.13■□□□□ 0.17
TUBA1AQ71U36 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TUBA1AQ71U36 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TUBA1AQ71U36 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.13■□□□□ 0.17
TUBA1AQ71U36 AL136379.1-201ENST00000623471 2642 ntBASIC16.13■□□□□ 0.17
TUBA1AQ71U36 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TUBA1AQ71U36 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TUBA1AQ71U36 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TUBA1AQ71U36 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.13■□□□□ 0.17
TUBA1AQ71U36 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.13■□□□□ 0.17
TUBA1AQ71U36 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
TUBA1AQ71U36 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TUBA1AQ71U36 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.13■□□□□ 0.17
TUBA1AQ71U36 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.13■□□□□ 0.17
TUBA1AQ71U36 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TUBA1AQ71U36 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TUBA1AQ71U36 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.13■□□□□ 0.17
TUBA1AQ71U36 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.13■□□□□ 0.17
TUBA1AQ71U36 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TUBA1AQ71U36 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.13■□□□□ 0.17
TUBA1AQ71U36 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TUBA1AQ71U36 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TUBA1AQ71U36 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TUBA1AQ71U36 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TUBA1AQ71U36 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TUBA1AQ71U36 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 STARP1-201ENST00000397973 869 ntBASIC16.12■□□□□ 0.17
TUBA1AQ71U36 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.12■□□□□ 0.17
TUBA1AQ71U36 AL671277.2-201ENST00000458060 996 ntBASIC16.12■□□□□ 0.17
TUBA1AQ71U36 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.12■□□□□ 0.17
TUBA1AQ71U36 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TUBA1AQ71U36 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TUBA1AQ71U36 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TUBA1AQ71U36 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TUBA1AQ71U36 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TUBA1AQ71U36 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TUBA1AQ71U36 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TUBA1AQ71U36 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TUBA1AQ71U36 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TUBA1AQ71U36 AL163051.1-201ENST00000569214 1512 ntBASIC16.11■□□□□ 0.17
TUBA1AQ71U36 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TUBA1AQ71U36 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TUBA1AQ71U36 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms