Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.67■□□□□ 0.1
NHLRC1Q6VVB1 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NHLRC1Q6VVB1 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NHLRC1Q6VVB1 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NHLRC1Q6VVB1 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
NHLRC1Q6VVB1 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
NHLRC1Q6VVB1 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NHLRC1Q6VVB1 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NHLRC1Q6VVB1 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NHLRC1Q6VVB1 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.67■□□□□ 0.1
NHLRC1Q6VVB1 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
NHLRC1Q6VVB1 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.67■□□□□ 0.1
NHLRC1Q6VVB1 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.67■□□□□ 0.1
NHLRC1Q6VVB1 TP73-AS1-210ENST00000637775 1455 ntBASIC15.67■□□□□ 0.1
NHLRC1Q6VVB1 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.67■□□□□ 0.1
NHLRC1Q6VVB1 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NHLRC1Q6VVB1 INTS4P1-201ENST00000438455 1935 ntBASIC15.67■□□□□ 0.1
NHLRC1Q6VVB1 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
NHLRC1Q6VVB1 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.67■□□□□ 0.1
NHLRC1Q6VVB1 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.67■□□□□ 0.1
NHLRC1Q6VVB1 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.67■□□□□ 0.1
NHLRC1Q6VVB1 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NHLRC1Q6VVB1 AC103564.2-201ENST00000432853 1299 ntBASIC15.67■□□□□ 0.1
NHLRC1Q6VVB1 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.67■□□□□ 0.1
NHLRC1Q6VVB1 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NHLRC1Q6VVB1 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.67■□□□□ 0.1
NHLRC1Q6VVB1 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.67■□□□□ 0.1
NHLRC1Q6VVB1 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
NHLRC1Q6VVB1 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
NHLRC1Q6VVB1 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NHLRC1Q6VVB1 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
NHLRC1Q6VVB1 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NHLRC1Q6VVB1 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
NHLRC1Q6VVB1 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NHLRC1Q6VVB1 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NHLRC1Q6VVB1 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.67■□□□□ 0.1
NHLRC1Q6VVB1 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NHLRC1Q6VVB1 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NHLRC1Q6VVB1 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
NHLRC1Q6VVB1 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NHLRC1Q6VVB1 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.67■□□□□ 0.1
NHLRC1Q6VVB1 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NHLRC1Q6VVB1 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.67■□□□□ 0.1
NHLRC1Q6VVB1 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
NHLRC1Q6VVB1 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
NHLRC1Q6VVB1 AL353593.2-201ENST00000602529 1483 ntBASIC15.66■□□□□ 0.1
NHLRC1Q6VVB1 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.66■□□□□ 0.1
NHLRC1Q6VVB1 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.66■□□□□ 0.1
NHLRC1Q6VVB1 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NHLRC1Q6VVB1 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
NHLRC1Q6VVB1 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
NHLRC1Q6VVB1 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NHLRC1Q6VVB1 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NHLRC1Q6VVB1 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NHLRC1Q6VVB1 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NHLRC1Q6VVB1 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
NHLRC1Q6VVB1 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
NHLRC1Q6VVB1 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
NHLRC1Q6VVB1 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.66■□□□□ 0.1
NHLRC1Q6VVB1 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.66■□□□□ 0.1
NHLRC1Q6VVB1 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
NHLRC1Q6VVB1 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
NHLRC1Q6VVB1 VENTXP7-201ENST00000475503 772 ntBASIC15.66■□□□□ 0.1
NHLRC1Q6VVB1 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NHLRC1Q6VVB1 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
NHLRC1Q6VVB1 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.66■□□□□ 0.1
NHLRC1Q6VVB1 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.66■□□□□ 0.1
NHLRC1Q6VVB1 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.66■□□□□ 0.1
NHLRC1Q6VVB1 Z69720.1-201ENST00000601483 472 ntBASIC15.66■□□□□ 0.1
NHLRC1Q6VVB1 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.66■□□□□ 0.1
NHLRC1Q6VVB1 AC092119.3-201ENST00000612618 583 ntBASIC15.66■□□□□ 0.1
NHLRC1Q6VVB1 AD001527.2-201ENST00000622994 785 ntBASIC15.66■□□□□ 0.1
NHLRC1Q6VVB1 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
NHLRC1Q6VVB1 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NHLRC1Q6VVB1 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NHLRC1Q6VVB1 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NHLRC1Q6VVB1 KRT8P10-201ENST00000450021 1447 ntBASIC15.66■□□□□ 0.1
NHLRC1Q6VVB1 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NHLRC1Q6VVB1 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
NHLRC1Q6VVB1 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NHLRC1Q6VVB1 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
NHLRC1Q6VVB1 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
NHLRC1Q6VVB1 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NHLRC1Q6VVB1 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.65■□□□□ 0.1
NHLRC1Q6VVB1 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NHLRC1Q6VVB1 CROCCP2-202ENST00000412962 2773 ntBASIC15.65■□□□□ 0.1
NHLRC1Q6VVB1 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NHLRC1Q6VVB1 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NHLRC1Q6VVB1 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NHLRC1Q6VVB1 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
NHLRC1Q6VVB1 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.65■□□□□ 0.1
NHLRC1Q6VVB1 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NHLRC1Q6VVB1 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NHLRC1Q6VVB1 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NHLRC1Q6VVB1 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
NHLRC1Q6VVB1 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
NHLRC1Q6VVB1 RCN1P2-201ENST00000398357 915 ntBASIC15.65■□□□□ 0.1
NHLRC1Q6VVB1 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.65■□□□□ 0.1
NHLRC1Q6VVB1 LINC00265-3P-201ENST00000447588 903 ntBASIC15.65■□□□□ 0.1
NHLRC1Q6VVB1 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms