Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.63■□□□□ 0.73
SHC4Q6S5L8 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.63■□□□□ 0.73
SHC4Q6S5L8 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.63■□□□□ 0.73
SHC4Q6S5L8 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHC4Q6S5L8 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHC4Q6S5L8 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHC4Q6S5L8 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHC4Q6S5L8 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHC4Q6S5L8 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
SHC4Q6S5L8 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SHC4Q6S5L8 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHC4Q6S5L8 INTS4P1-201ENST00000438455 1935 ntBASIC19.63■□□□□ 0.73
SHC4Q6S5L8 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SHC4Q6S5L8 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
SHC4Q6S5L8 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHC4Q6S5L8 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SHC4Q6S5L8 EGFEM1P-202ENST00000431685 1563 ntBASIC19.62■□□□□ 0.73
SHC4Q6S5L8 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SHC4Q6S5L8 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
SHC4Q6S5L8 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
SHC4Q6S5L8 IER3-202ENST00000376377 1350 ntBASIC19.62■□□□□ 0.73
SHC4Q6S5L8 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.62■□□□□ 0.73
SHC4Q6S5L8 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SHC4Q6S5L8 IGHV3-47-201ENST00000425060 335 ntBASIC19.62■□□□□ 0.73
SHC4Q6S5L8 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.62■□□□□ 0.73
SHC4Q6S5L8 TOB2P1-201ENST00000469761 992 ntBASIC19.62■□□□□ 0.73
SHC4Q6S5L8 STK19B-204ENST00000512515 211 ntBASIC19.62■□□□□ 0.73
SHC4Q6S5L8 AC087388.1-201ENST00000571370 1112 ntBASIC19.62■□□□□ 0.73
SHC4Q6S5L8 MIR3180-1-201ENST00000580374 94 ntBASIC19.62■□□□□ 0.73
SHC4Q6S5L8 MIR3180-3-201ENST00000584616 94 ntBASIC19.62■□□□□ 0.73
SHC4Q6S5L8 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.62■□□□□ 0.73
SHC4Q6S5L8 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SHC4Q6S5L8 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.62■□□□□ 0.73
SHC4Q6S5L8 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.62■□□□□ 0.73
SHC4Q6S5L8 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
SHC4Q6S5L8 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SHC4Q6S5L8 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHC4Q6S5L8 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.62■□□□□ 0.73
SHC4Q6S5L8 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SHC4Q6S5L8 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SHC4Q6S5L8 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SHC4Q6S5L8 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.62■□□□□ 0.73
SHC4Q6S5L8 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.62■□□□□ 0.73
SHC4Q6S5L8 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SHC4Q6S5L8 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHC4Q6S5L8 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.61■□□□□ 0.73
SHC4Q6S5L8 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHC4Q6S5L8 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
SHC4Q6S5L8 AL118508.1-201ENST00000613502 2345 ntBASIC19.61■□□□□ 0.73
SHC4Q6S5L8 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHC4Q6S5L8 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.61■□□□□ 0.73
SHC4Q6S5L8 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.61■□□□□ 0.73
SHC4Q6S5L8 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SHC4Q6S5L8 KRT17P6-201ENST00000453795 1220 ntBASIC19.61■□□□□ 0.73
SHC4Q6S5L8 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.61■□□□□ 0.73
SHC4Q6S5L8 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
SHC4Q6S5L8 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.61■□□□□ 0.73
SHC4Q6S5L8 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SHC4Q6S5L8 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SHC4Q6S5L8 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.61■□□□□ 0.73
SHC4Q6S5L8 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHC4Q6S5L8 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHC4Q6S5L8 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.61■□□□□ 0.73
SHC4Q6S5L8 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SHC4Q6S5L8 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SHC4Q6S5L8 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.61■□□□□ 0.73
SHC4Q6S5L8 NSUN5P1-202ENST00000421140 1535 ntBASIC19.61■□□□□ 0.73
SHC4Q6S5L8 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHC4Q6S5L8 NSUN5P2-203ENST00000457352 1529 ntBASIC19.61■□□□□ 0.73
SHC4Q6S5L8 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.61■□□□□ 0.73
SHC4Q6S5L8 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
SHC4Q6S5L8 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.61■□□□□ 0.73
SHC4Q6S5L8 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.6■□□□□ 0.73
SHC4Q6S5L8 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHC4Q6S5L8 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SHC4Q6S5L8 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.6■□□□□ 0.73
SHC4Q6S5L8 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SHC4Q6S5L8 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SHC4Q6S5L8 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.6■□□□□ 0.73
SHC4Q6S5L8 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.6■□□□□ 0.73
SHC4Q6S5L8 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SHC4Q6S5L8 RCN1P2-201ENST00000398357 915 ntBASIC19.6■□□□□ 0.73
SHC4Q6S5L8 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.6■□□□□ 0.73
SHC4Q6S5L8 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SHC4Q6S5L8 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SHC4Q6S5L8 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.6■□□□□ 0.73
SHC4Q6S5L8 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.6■□□□□ 0.73
SHC4Q6S5L8 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SHC4Q6S5L8 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.6■□□□□ 0.73
SHC4Q6S5L8 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.6■□□□□ 0.73
SHC4Q6S5L8 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.6■□□□□ 0.73
SHC4Q6S5L8 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.6■□□□□ 0.73
SHC4Q6S5L8 AC073592.5-201ENST00000624854 528 ntBASIC19.6■□□□□ 0.73
SHC4Q6S5L8 AL590326.2-201ENST00000625139 305 ntBASIC19.6■□□□□ 0.73
SHC4Q6S5L8 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.6■□□□□ 0.73
SHC4Q6S5L8 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SHC4Q6S5L8 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHC4Q6S5L8 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SHC4Q6S5L8 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHC4Q6S5L8 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms