Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 STK19B-204ENST00000512515 211 ntBASIC20.8■□□□□ 0.92
RNF20Q5VTR2 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.8■□□□□ 0.92
RNF20Q5VTR2 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
RNF20Q5VTR2 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.8■□□□□ 0.92
RNF20Q5VTR2 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.8■□□□□ 0.92
RNF20Q5VTR2 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF20Q5VTR2 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RNF20Q5VTR2 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF20Q5VTR2 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF20Q5VTR2 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC20.8■□□□□ 0.92
RNF20Q5VTR2 AC009336.1-201ENST00000608941 1553 ntBASIC20.8■□□□□ 0.92
RNF20Q5VTR2 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.8■□□□□ 0.92
RNF20Q5VTR2 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.8■□□□□ 0.92
RNF20Q5VTR2 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF20Q5VTR2 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF20Q5VTR2 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RNF20Q5VTR2 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF20Q5VTR2 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF20Q5VTR2 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF20Q5VTR2 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.79■□□□□ 0.92
RNF20Q5VTR2 KLF4P1-201ENST00000412782 1185 ntBASIC20.79■□□□□ 0.92
RNF20Q5VTR2 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF20Q5VTR2 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF20Q5VTR2 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF20Q5VTR2 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.79■□□□□ 0.92
RNF20Q5VTR2 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.79■□□□□ 0.92
RNF20Q5VTR2 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF20Q5VTR2 AC093458.2-201ENST00000623150 629 ntBASIC20.79■□□□□ 0.92
RNF20Q5VTR2 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF20Q5VTR2 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RNF20Q5VTR2 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF20Q5VTR2 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF20Q5VTR2 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RNF20Q5VTR2 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF20Q5VTR2 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF20Q5VTR2 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF20Q5VTR2 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF20Q5VTR2 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF20Q5VTR2 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF20Q5VTR2 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF20Q5VTR2 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF20Q5VTR2 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF20Q5VTR2 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF20Q5VTR2 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF20Q5VTR2 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC20.78■□□□□ 0.92
RNF20Q5VTR2 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC20.78■□□□□ 0.92
RNF20Q5VTR2 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
RNF20Q5VTR2 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF20Q5VTR2 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF20Q5VTR2 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RNF20Q5VTR2 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC20.78■□□□□ 0.92
RNF20Q5VTR2 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF20Q5VTR2 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.78■□□□□ 0.92
RNF20Q5VTR2 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF20Q5VTR2 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
RNF20Q5VTR2 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF20Q5VTR2 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF20Q5VTR2 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF20Q5VTR2 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF20Q5VTR2 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.78■□□□□ 0.92
RNF20Q5VTR2 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF20Q5VTR2 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.78■□□□□ 0.92
RNF20Q5VTR2 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.78■□□□□ 0.92
RNF20Q5VTR2 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.78■□□□□ 0.92
RNF20Q5VTR2 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.78■□□□□ 0.92
RNF20Q5VTR2 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.78■□□□□ 0.92
RNF20Q5VTR2 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF20Q5VTR2 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.78■□□□□ 0.92
RNF20Q5VTR2 AC099336.1-202ENST00000602961 463 ntBASIC20.78■□□□□ 0.92
RNF20Q5VTR2 AC073592.5-201ENST00000624854 528 ntBASIC20.78■□□□□ 0.92
RNF20Q5VTR2 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF20Q5VTR2 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF20Q5VTR2 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF20Q5VTR2 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF20Q5VTR2 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF20Q5VTR2 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.78■□□□□ 0.92
RNF20Q5VTR2 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF20Q5VTR2 AC012313.1-201ENST00000593393 3059 ntBASIC20.78■□□□□ 0.92
RNF20Q5VTR2 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
RNF20Q5VTR2 AC132938.5-201ENST00000624980 1813 ntBASIC20.78■□□□□ 0.92
RNF20Q5VTR2 AC093525.9-201ENST00000624961 1746 ntBASIC20.78■□□□□ 0.92
RNF20Q5VTR2 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF20Q5VTR2 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF20Q5VTR2 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
RNF20Q5VTR2 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
RNF20Q5VTR2 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC20.77■□□□□ 0.92
RNF20Q5VTR2 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF20Q5VTR2 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
RNF20Q5VTR2 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC20.77■□□□□ 0.92
RNF20Q5VTR2 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RNF20Q5VTR2 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
RNF20Q5VTR2 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF20Q5VTR2 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF20Q5VTR2 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC20.77■□□□□ 0.92
RNF20Q5VTR2 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
RNF20Q5VTR2 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RNF20Q5VTR2 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF20Q5VTR2 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RNF20Q5VTR2 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.77■□□□□ 0.92
RNF20Q5VTR2 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms