Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRK2Q5S007 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
LRRK2Q5S007 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRK2Q5S007 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRK2Q5S007 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC14.93□□□□□ -0.02
LRRK2Q5S007 PHGDH-209ENST00000641074 1780 ntBASIC14.93□□□□□ -0.02
LRRK2Q5S007 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LRRK2Q5S007 AC093010.1-201ENST00000473625 1624 ntBASIC14.93□□□□□ -0.02
LRRK2Q5S007 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
LRRK2Q5S007 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LRRK2Q5S007 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRK2Q5S007 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRK2Q5S007 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRK2Q5S007 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
LRRK2Q5S007 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRRK2Q5S007 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRRK2Q5S007 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.93□□□□□ -0.02
LRRK2Q5S007 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.93□□□□□ -0.02
LRRK2Q5S007 AL512343.1-201ENST00000605837 169 ntBASIC14.93□□□□□ -0.02
LRRK2Q5S007 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRRK2Q5S007 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC14.93□□□□□ -0.02
LRRK2Q5S007 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRK2Q5S007 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
LRRK2Q5S007 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRK2Q5S007 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRK2Q5S007 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRK2Q5S007 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRK2Q5S007 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRRK2Q5S007 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRRK2Q5S007 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRRK2Q5S007 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC14.93□□□□□ -0.02
LRRK2Q5S007 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.93□□□□□ -0.02
LRRK2Q5S007 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC14.93□□□□□ -0.02
LRRK2Q5S007 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC14.93□□□□□ -0.02
LRRK2Q5S007 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRK2Q5S007 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.93□□□□□ -0.02
LRRK2Q5S007 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.93□□□□□ -0.02
LRRK2Q5S007 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.93□□□□□ -0.02
LRRK2Q5S007 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC14.93□□□□□ -0.02
LRRK2Q5S007 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.93□□□□□ -0.02
LRRK2Q5S007 NAT9-224ENST00000583757 583 ntTSL 3 BASIC14.93□□□□□ -0.02
LRRK2Q5S007 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRRK2Q5S007 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC14.93□□□□□ -0.02
LRRK2Q5S007 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.93□□□□□ -0.02
LRRK2Q5S007 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRRK2Q5S007 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRRK2Q5S007 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC14.92□□□□□ -0.02
LRRK2Q5S007 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.92□□□□□ -0.02
LRRK2Q5S007 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC14.92□□□□□ -0.02
LRRK2Q5S007 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LRRK2Q5S007 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
LRRK2Q5S007 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LRRK2Q5S007 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.92□□□□□ -0.02
LRRK2Q5S007 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.92□□□□□ -0.02
LRRK2Q5S007 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.92□□□□□ -0.02
LRRK2Q5S007 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRRK2Q5S007 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC14.92□□□□□ -0.02
LRRK2Q5S007 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRRK2Q5S007 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LRRK2Q5S007 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRRK2Q5S007 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRRK2Q5S007 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.92□□□□□ -0.02
LRRK2Q5S007 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.92□□□□□ -0.02
LRRK2Q5S007 AP005482.1-201ENST00000563722 1273 ntBASIC14.92□□□□□ -0.02
LRRK2Q5S007 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.92□□□□□ -0.02
LRRK2Q5S007 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRRK2Q5S007 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
LRRK2Q5S007 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LRRK2Q5S007 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRRK2Q5S007 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
LRRK2Q5S007 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC14.92□□□□□ -0.02
LRRK2Q5S007 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRRK2Q5S007 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRRK2Q5S007 SLC7A15P-201ENST00000424028 1363 ntBASIC14.92□□□□□ -0.02
LRRK2Q5S007 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRRK2Q5S007 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRRK2Q5S007 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRRK2Q5S007 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LRRK2Q5S007 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC14.92□□□□□ -0.02
LRRK2Q5S007 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
LRRK2Q5S007 SLC25A6P2-201ENST00000497974 877 ntBASIC14.92□□□□□ -0.02
LRRK2Q5S007 AC093004.1-201ENST00000508850 424 ntBASIC14.92□□□□□ -0.02
LRRK2Q5S007 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.92□□□□□ -0.02
LRRK2Q5S007 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.92□□□□□ -0.02
LRRK2Q5S007 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRRK2Q5S007 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.92□□□□□ -0.02
LRRK2Q5S007 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC14.91□□□□□ -0.02
LRRK2Q5S007 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRRK2Q5S007 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LRRK2Q5S007 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRRK2Q5S007 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.91□□□□□ -0.02
LRRK2Q5S007 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRRK2Q5S007 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LRRK2Q5S007 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC14.91□□□□□ -0.02
LRRK2Q5S007 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LRRK2Q5S007 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRRK2Q5S007 AL080243.2-201ENST00000418783 582 ntBASIC14.91□□□□□ -0.02
LRRK2Q5S007 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.91□□□□□ -0.02
LRRK2Q5S007 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.91□□□□□ -0.02
LRRK2Q5S007 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms