Protein–RNA interactions for Protein: Q5JQF7

LINC01556, Putative uncharacterized protein encoded by LINC01556, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01556Q5JQF7 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 NKAPP1-205ENST00000585790 367 ntBASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 COPE-211ENST00000600932 1144 ntTSL 5 BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
LINC01556Q5JQF7 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
LINC01556Q5JQF7 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC01556Q5JQF7 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01556Q5JQF7 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC01556Q5JQF7 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01556Q5JQF7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
LINC01556Q5JQF7 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01556Q5JQF7 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01556Q5JQF7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01556Q5JQF7 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC11.82□□□□□ -0.52
LINC01556Q5JQF7 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
LINC01556Q5JQF7 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01556Q5JQF7 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01556Q5JQF7 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
LINC01556Q5JQF7 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC11.82□□□□□ -0.52
LINC01556Q5JQF7 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC01556Q5JQF7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC11.82□□□□□ -0.52
LINC01556Q5JQF7 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
LINC01556Q5JQF7 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
LINC01556Q5JQF7 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC11.82□□□□□ -0.52
LINC01556Q5JQF7 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01556Q5JQF7 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC11.82□□□□□ -0.52
LINC01556Q5JQF7 ACTG1P4-201ENST00000425123 1122 ntBASIC11.82□□□□□ -0.52
LINC01556Q5JQF7 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
LINC01556Q5JQF7 AF186996.4-201ENST00000467186 377 ntBASIC11.82□□□□□ -0.52
LINC01556Q5JQF7 BX005266.1-201ENST00000473402 457 ntBASIC11.82□□□□□ -0.52
LINC01556Q5JQF7 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC01556Q5JQF7 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC01556Q5JQF7 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
LINC01556Q5JQF7 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC11.82□□□□□ -0.52
LINC01556Q5JQF7 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC11.82□□□□□ -0.52
LINC01556Q5JQF7 SART3-203ENST00000546611 1184 ntBASIC11.82□□□□□ -0.52
LINC01556Q5JQF7 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC11.82□□□□□ -0.52
LINC01556Q5JQF7 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC11.82□□□□□ -0.52
LINC01556Q5JQF7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC11.82□□□□□ -0.52
LINC01556Q5JQF7 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC11.82□□□□□ -0.52
LINC01556Q5JQF7 AL589182.2-201ENST00000619332 1049 ntBASIC11.82□□□□□ -0.52
LINC01556Q5JQF7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC11.82□□□□□ -0.52
LINC01556Q5JQF7 VPS51-217ENST00000639871 243 ntTSL 5 BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms