Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHRFAM7AQ494W8 MIR149-201ENST00000384879 89 ntBASIC15.29■□□□□ 0.04
CHRFAM7AQ494W8 MIR3180-5-201ENST00000583743 153 ntBASIC15.29■□□□□ 0.04
CHRFAM7AQ494W8 AC079602.3-201ENST00000623931 403 ntBASIC15.29■□□□□ 0.04
CHRFAM7AQ494W8 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CHRFAM7AQ494W8 AL391807.1-203ENST00000604392 2365 ntBASIC15.29■□□□□ 0.04
CHRFAM7AQ494W8 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHRFAM7AQ494W8 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHRFAM7AQ494W8 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHRFAM7AQ494W8 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CHRFAM7AQ494W8 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHRFAM7AQ494W8 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.29■□□□□ 0.04
CHRFAM7AQ494W8 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHRFAM7AQ494W8 SDHAP2-201ENST00000455183 2001 ntBASIC15.29■□□□□ 0.04
CHRFAM7AQ494W8 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CHRFAM7AQ494W8 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHRFAM7AQ494W8 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHRFAM7AQ494W8 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CHRFAM7AQ494W8 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHRFAM7AQ494W8 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.29■□□□□ 0.04
CHRFAM7AQ494W8 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHRFAM7AQ494W8 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHRFAM7AQ494W8 GPAT2P1-201ENST00000444924 1672 ntBASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 AL163051.1-201ENST00000569214 1512 ntBASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 AD000864.1-201ENST00000624076 2295 ntBASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 HLA-A-201ENST00000376802 1334 ntBASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 Z69720.1-201ENST00000601483 472 ntBASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 IGHV3-41-201ENST00000613121 348 ntBASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 AC112497.1-201ENST00000624824 639 ntBASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 AL157888.1-201ENST00000631930 593 ntBASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 AC093010.1-201ENST00000473625 1624 ntBASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRFAM7AQ494W8 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CHRFAM7AQ494W8 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CHRFAM7AQ494W8 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CHRFAM7AQ494W8 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHRFAM7AQ494W8 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.27■□□□□ 0.04
CHRFAM7AQ494W8 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHRFAM7AQ494W8 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHRFAM7AQ494W8 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHRFAM7AQ494W8 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.27■□□□□ 0.04
CHRFAM7AQ494W8 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHRFAM7AQ494W8 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.27■□□□□ 0.04
CHRFAM7AQ494W8 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHRFAM7AQ494W8 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.27■□□□□ 0.04
CHRFAM7AQ494W8 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHRFAM7AQ494W8 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CHRFAM7AQ494W8 KRT16P4-201ENST00000453883 522 ntBASIC15.27■□□□□ 0.04
CHRFAM7AQ494W8 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.27■□□□□ 0.04
CHRFAM7AQ494W8 SEC1P-202ENST00000473944 940 ntBASIC15.27■□□□□ 0.04
CHRFAM7AQ494W8 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.27■□□□□ 0.04
CHRFAM7AQ494W8 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.27■□□□□ 0.04
CHRFAM7AQ494W8 MIR3917-201ENST00000580971 93 ntBASIC15.27■□□□□ 0.04
CHRFAM7AQ494W8 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.27■□□□□ 0.04
CHRFAM7AQ494W8 AC099336.1-202ENST00000602961 463 ntBASIC15.27■□□□□ 0.04
CHRFAM7AQ494W8 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.27■□□□□ 0.04
CHRFAM7AQ494W8 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.27■□□□□ 0.04
CHRFAM7AQ494W8 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CHRFAM7AQ494W8 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.27■□□□□ 0.03
CHRFAM7AQ494W8 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHRFAM7AQ494W8 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CHRFAM7AQ494W8 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms