Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 AJ011932.1-201ENST00000621707 465 ntBASIC16.79■□□□□ 0.28
HLA-BQ31612 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-BQ31612 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
HLA-BQ31612 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-BQ31612 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.79■□□□□ 0.28
HLA-BQ31612 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
HLA-BQ31612 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-BQ31612 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.79■□□□□ 0.28
HLA-BQ31612 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
HLA-BQ31612 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.79■□□□□ 0.28
HLA-BQ31612 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-BQ31612 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.79■□□□□ 0.28
HLA-BQ31612 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-BQ31612 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-BQ31612 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.78■□□□□ 0.28
HLA-BQ31612 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.78■□□□□ 0.28
HLA-BQ31612 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.78■□□□□ 0.28
HLA-BQ31612 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-BQ31612 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
HLA-BQ31612 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-BQ31612 AP000974.1-201ENST00000623909 2387 ntBASIC16.78■□□□□ 0.28
HLA-BQ31612 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-BQ31612 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-BQ31612 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-BQ31612 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-BQ31612 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-BQ31612 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
HLA-BQ31612 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-BQ31612 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-BQ31612 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-BQ31612 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.78■□□□□ 0.28
HLA-BQ31612 PMS2P4-201ENST00000412466 1052 ntBASIC16.78■□□□□ 0.28
HLA-BQ31612 TFAMP1-201ENST00000412727 736 ntBASIC16.78■□□□□ 0.28
HLA-BQ31612 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.78■□□□□ 0.28
HLA-BQ31612 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.78■□□□□ 0.28
HLA-BQ31612 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-BQ31612 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.78■□□□□ 0.28
HLA-BQ31612 CNN2P2-201ENST00000443536 909 ntBASIC16.78■□□□□ 0.28
HLA-BQ31612 CNN2P3-201ENST00000450201 906 ntBASIC16.78■□□□□ 0.28
HLA-BQ31612 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-BQ31612 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.78■□□□□ 0.28
HLA-BQ31612 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.78■□□□□ 0.28
HLA-BQ31612 RN7SL589P-201ENST00000481268 310 ntBASIC16.78■□□□□ 0.28
HLA-BQ31612 INGX-202ENST00000489074 768 ntBASIC16.78■□□□□ 0.28
HLA-BQ31612 AC069335.1-201ENST00000489972 472 ntBASIC16.78■□□□□ 0.28
HLA-BQ31612 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.78■□□□□ 0.28
HLA-BQ31612 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.78■□□□□ 0.28
HLA-BQ31612 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-BQ31612 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-BQ31612 AL136317.3-201ENST00000618497 906 ntBASIC16.78■□□□□ 0.28
HLA-BQ31612 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.78■□□□□ 0.28
HLA-BQ31612 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.78■□□□□ 0.28
HLA-BQ31612 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-BQ31612 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-BQ31612 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
HLA-BQ31612 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.78■□□□□ 0.28
HLA-BQ31612 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.78■□□□□ 0.28
HLA-BQ31612 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-BQ31612 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-BQ31612 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-BQ31612 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-BQ31612 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-BQ31612 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.77■□□□□ 0.28
HLA-BQ31612 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.77■□□□□ 0.28
HLA-BQ31612 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.77■□□□□ 0.28
HLA-BQ31612 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-BQ31612 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-BQ31612 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-BQ31612 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-BQ31612 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
HLA-BQ31612 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.77■□□□□ 0.28
HLA-BQ31612 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
HLA-BQ31612 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.77■□□□□ 0.28
HLA-BQ31612 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
HLA-BQ31612 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-BQ31612 AC190387.1-201ENST00000551683 408 ntBASIC16.77■□□□□ 0.28
HLA-BQ31612 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.77■□□□□ 0.28
HLA-BQ31612 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.77■□□□□ 0.28
HLA-BQ31612 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.77■□□□□ 0.28
HLA-BQ31612 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-BQ31612 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.77■□□□□ 0.28
HLA-BQ31612 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-BQ31612 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.77■□□□□ 0.28
HLA-BQ31612 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-BQ31612 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-BQ31612 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HLA-BQ31612 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HLA-BQ31612 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
HLA-BQ31612 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
HLA-BQ31612 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.77■□□□□ 0.27
HLA-BQ31612 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.77■□□□□ 0.27
HLA-BQ31612 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HLA-BQ31612 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HLA-BQ31612 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
HLA-BQ31612 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
HLA-BQ31612 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HLA-BQ31612 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-BQ31612 REXO1L11P-201ENST00000620964 1927 ntBASIC16.76■□□□□ 0.27
HLA-BQ31612 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
HLA-BQ31612 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms