Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM71Q2Q1W2 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
TRIM71Q2Q1W2 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM71Q2Q1W2 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.86■□□□□ 0.61
TRIM71Q2Q1W2 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM71Q2Q1W2 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM71Q2Q1W2 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM71Q2Q1W2 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM71Q2Q1W2 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM71Q2Q1W2 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM71Q2Q1W2 AC002056.1-201ENST00000395613 760 ntBASIC18.86■□□□□ 0.61
TRIM71Q2Q1W2 AL627223.1-201ENST00000416693 442 ntBASIC18.86■□□□□ 0.61
TRIM71Q2Q1W2 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM71Q2Q1W2 AC140658.5-201ENST00000438532 169 ntBASIC18.86■□□□□ 0.61
TRIM71Q2Q1W2 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM71Q2Q1W2 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.86■□□□□ 0.61
TRIM71Q2Q1W2 KRT8P48-201ENST00000515599 1220 ntBASIC18.86■□□□□ 0.61
TRIM71Q2Q1W2 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.86■□□□□ 0.61
TRIM71Q2Q1W2 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM71Q2Q1W2 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM71Q2Q1W2 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.86■□□□□ 0.61
TRIM71Q2Q1W2 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TRIM71Q2Q1W2 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
TRIM71Q2Q1W2 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM71Q2Q1W2 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.86■□□□□ 0.61
TRIM71Q2Q1W2 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
TRIM71Q2Q1W2 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.86■□□□□ 0.61
TRIM71Q2Q1W2 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM71Q2Q1W2 AC138028.4-201ENST00000564984 1845 ntBASIC18.86■□□□□ 0.61
TRIM71Q2Q1W2 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.86■□□□□ 0.61
TRIM71Q2Q1W2 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM71Q2Q1W2 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM71Q2Q1W2 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM71Q2Q1W2 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM71Q2Q1W2 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
TRIM71Q2Q1W2 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.85■□□□□ 0.61
TRIM71Q2Q1W2 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
TRIM71Q2Q1W2 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM71Q2Q1W2 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM71Q2Q1W2 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM71Q2Q1W2 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM71Q2Q1W2 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM71Q2Q1W2 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM71Q2Q1W2 AL035633.1-201ENST00000406139 838 ntBASIC18.85■□□□□ 0.61
TRIM71Q2Q1W2 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.85■□□□□ 0.61
TRIM71Q2Q1W2 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TRIM71Q2Q1W2 AC005498.2-205ENST00000593218 784 ntBASIC18.85■□□□□ 0.61
TRIM71Q2Q1W2 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM71Q2Q1W2 AC026120.1-201ENST00000611536 926 ntBASIC18.85■□□□□ 0.61
TRIM71Q2Q1W2 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.85■□□□□ 0.61
TRIM71Q2Q1W2 AC009093.7-201ENST00000623853 1223 ntBASIC18.85■□□□□ 0.61
TRIM71Q2Q1W2 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM71Q2Q1W2 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM71Q2Q1W2 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM71Q2Q1W2 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM71Q2Q1W2 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM71Q2Q1W2 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TRIM71Q2Q1W2 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM71Q2Q1W2 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TRIM71Q2Q1W2 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM71Q2Q1W2 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM71Q2Q1W2 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.85■□□□□ 0.61
TRIM71Q2Q1W2 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM71Q2Q1W2 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM71Q2Q1W2 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TRIM71Q2Q1W2 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM71Q2Q1W2 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM71Q2Q1W2 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM71Q2Q1W2 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
TRIM71Q2Q1W2 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM71Q2Q1W2 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.84■□□□□ 0.61
TRIM71Q2Q1W2 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
TRIM71Q2Q1W2 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TRIM71Q2Q1W2 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TRIM71Q2Q1W2 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.84■□□□□ 0.61
TRIM71Q2Q1W2 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.84■□□□□ 0.61
TRIM71Q2Q1W2 TIMM8BP1-201ENST00000452384 211 ntBASIC18.84■□□□□ 0.61
TRIM71Q2Q1W2 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM71Q2Q1W2 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TRIM71Q2Q1W2 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM71Q2Q1W2 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM71Q2Q1W2 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
TRIM71Q2Q1W2 AC025678.2-201ENST00000562061 970 ntBASIC18.84■□□□□ 0.61
TRIM71Q2Q1W2 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.84■□□□□ 0.61
TRIM71Q2Q1W2 LINC01451-201ENST00000623792 534 ntBASIC18.84■□□□□ 0.61
TRIM71Q2Q1W2 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
TRIM71Q2Q1W2 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM71Q2Q1W2 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM71Q2Q1W2 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM71Q2Q1W2 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM71Q2Q1W2 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM71Q2Q1W2 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
TRIM71Q2Q1W2 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
TRIM71Q2Q1W2 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM71Q2Q1W2 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM71Q2Q1W2 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
TRIM71Q2Q1W2 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM71Q2Q1W2 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM71Q2Q1W2 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
TRIM71Q2Q1W2 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms