Protein–RNA interactions for Protein: Q16563

SYPL1, Synaptophysin-like protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1Q16563 CHCHD2P8-201ENST00000429873 447 ntBASIC16.22■□□□□ 0.19
SYPL1Q16563 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.22■□□□□ 0.19
SYPL1Q16563 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.22■□□□□ 0.19
SYPL1Q16563 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.22■□□□□ 0.19
SYPL1Q16563 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SYPL1Q16563 AP005901.3-202ENST00000581653 237 ntBASIC16.22■□□□□ 0.19
SYPL1Q16563 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.22■□□□□ 0.19
SYPL1Q16563 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
SYPL1Q16563 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SYPL1Q16563 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SYPL1Q16563 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SYPL1Q16563 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.22■□□□□ 0.19
SYPL1Q16563 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
SYPL1Q16563 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
SYPL1Q16563 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SYPL1Q16563 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SYPL1Q16563 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SYPL1Q16563 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SYPL1Q16563 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
SYPL1Q16563 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SYPL1Q16563 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
SYPL1Q16563 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SYPL1Q16563 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.21■□□□□ 0.19
SYPL1Q16563 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SYPL1Q16563 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.21■□□□□ 0.19
SYPL1Q16563 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
SYPL1Q16563 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.21■□□□□ 0.19
SYPL1Q16563 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SYPL1Q16563 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SYPL1Q16563 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.21■□□□□ 0.19
SYPL1Q16563 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SYPL1Q16563 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SYPL1Q16563 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SYPL1Q16563 AC246785.2-201ENST00000432512 513 ntBASIC16.21■□□□□ 0.19
SYPL1Q16563 AC103564.2-201ENST00000432853 1299 ntBASIC16.21■□□□□ 0.19
SYPL1Q16563 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.21■□□□□ 0.19
SYPL1Q16563 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.21■□□□□ 0.19
SYPL1Q16563 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.21■□□□□ 0.19
SYPL1Q16563 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.21■□□□□ 0.19
SYPL1Q16563 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SYPL1Q16563 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SYPL1Q16563 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SYPL1Q16563 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SYPL1Q16563 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SYPL1Q16563 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.21■□□□□ 0.19
SYPL1Q16563 LINC02012-201ENST00000608206 1725 ntBASIC16.21■□□□□ 0.19
SYPL1Q16563 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SYPL1Q16563 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.21■□□□□ 0.19
SYPL1Q16563 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SYPL1Q16563 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.21■□□□□ 0.19
SYPL1Q16563 AC092053.1-201ENST00000605787 1936 ntBASIC16.21■□□□□ 0.19
SYPL1Q16563 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SYPL1Q16563 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
SYPL1Q16563 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SYPL1Q16563 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SYPL1Q16563 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
SYPL1Q16563 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SYPL1Q16563 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SYPL1Q16563 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SYPL1Q16563 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SYPL1Q16563 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
SYPL1Q16563 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SYPL1Q16563 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SYPL1Q16563 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
SYPL1Q16563 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SYPL1Q16563 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SYPL1Q16563 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SYPL1Q16563 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SYPL1Q16563 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.2■□□□□ 0.18
SYPL1Q16563 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SYPL1Q16563 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SYPL1Q16563 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SYPL1Q16563 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
SYPL1Q16563 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
SYPL1Q16563 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SYPL1Q16563 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SYPL1Q16563 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SYPL1Q16563 AC111152.3-201ENST00000569699 673 ntBASIC16.2■□□□□ 0.18
SYPL1Q16563 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.2■□□□□ 0.18
SYPL1Q16563 AC116407.4-201ENST00000623319 1061 ntBASIC16.2■□□□□ 0.18
SYPL1Q16563 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.2■□□□□ 0.18
SYPL1Q16563 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.2■□□□□ 0.18
SYPL1Q16563 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.2■□□□□ 0.18
SYPL1Q16563 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.2■□□□□ 0.18
SYPL1Q16563 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SYPL1Q16563 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SYPL1Q16563 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SYPL1Q16563 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SYPL1Q16563 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SYPL1Q16563 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SYPL1Q16563 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.19■□□□□ 0.18
SYPL1Q16563 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.19■□□□□ 0.18
SYPL1Q16563 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SYPL1Q16563 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.19■□□□□ 0.18
SYPL1Q16563 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SYPL1Q16563 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SYPL1Q16563 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SYPL1Q16563 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SYPL1Q16563 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SYPL1Q16563 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms