Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC14.75□□□□□ -0.05
SSBP1Q04837 AC009154.2-201ENST00000621177 724 ntBASIC14.75□□□□□ -0.05
SSBP1Q04837 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.75□□□□□ -0.05
SSBP1Q04837 AC073648.6-201ENST00000641589 218 ntBASIC14.75□□□□□ -0.05
SSBP1Q04837 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSBP1Q04837 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SSBP1Q04837 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.75□□□□□ -0.05
SSBP1Q04837 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSBP1Q04837 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
SSBP1Q04837 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSBP1Q04837 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SSBP1Q04837 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSBP1Q04837 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.75□□□□□ -0.05
SSBP1Q04837 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSBP1Q04837 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SSBP1Q04837 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.75□□□□□ -0.05
SSBP1Q04837 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC14.75□□□□□ -0.05
SSBP1Q04837 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSBP1Q04837 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SSBP1Q04837 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SSBP1Q04837 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSBP1Q04837 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSBP1Q04837 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.74□□□□□ -0.05
SSBP1Q04837 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SSBP1Q04837 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.74□□□□□ -0.05
SSBP1Q04837 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
SSBP1Q04837 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SSBP1Q04837 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSBP1Q04837 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSBP1Q04837 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSBP1Q04837 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSBP1Q04837 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSBP1Q04837 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC14.74□□□□□ -0.05
SSBP1Q04837 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.74□□□□□ -0.05
SSBP1Q04837 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC14.74□□□□□ -0.05
SSBP1Q04837 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSBP1Q04837 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SSBP1Q04837 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC14.74□□□□□ -0.05
SSBP1Q04837 C1QBPP2-201ENST00000528754 825 ntBASIC14.74□□□□□ -0.05
SSBP1Q04837 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC14.74□□□□□ -0.05
SSBP1Q04837 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSBP1Q04837 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
SSBP1Q04837 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSBP1Q04837 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SSBP1Q04837 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SSBP1Q04837 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSBP1Q04837 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSBP1Q04837 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SSBP1Q04837 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSBP1Q04837 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.74□□□□□ -0.05
SSBP1Q04837 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SSBP1Q04837 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
SSBP1Q04837 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.74□□□□□ -0.05
SSBP1Q04837 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SSBP1Q04837 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SSBP1Q04837 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SSBP1Q04837 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSBP1Q04837 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SSBP1Q04837 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
SSBP1Q04837 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.73□□□□□ -0.05
SSBP1Q04837 AC092171.3-201ENST00000610122 2651 ntBASIC14.73□□□□□ -0.05
SSBP1Q04837 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SSBP1Q04837 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SSBP1Q04837 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSBP1Q04837 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.73□□□□□ -0.05
SSBP1Q04837 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.73□□□□□ -0.05
SSBP1Q04837 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSBP1Q04837 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSBP1Q04837 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSBP1Q04837 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSBP1Q04837 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC14.73□□□□□ -0.05
SSBP1Q04837 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.73□□□□□ -0.05
SSBP1Q04837 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC14.73□□□□□ -0.05
SSBP1Q04837 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
SSBP1Q04837 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC14.73□□□□□ -0.05
SSBP1Q04837 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSBP1Q04837 AC112698.1-201ENST00000510299 916 ntBASIC14.73□□□□□ -0.05
SSBP1Q04837 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
SSBP1Q04837 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.73□□□□□ -0.05
SSBP1Q04837 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC14.73□□□□□ -0.05
SSBP1Q04837 GXYLT1P4-201ENST00000613576 1192 ntBASIC14.73□□□□□ -0.05
SSBP1Q04837 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC14.73□□□□□ -0.05
SSBP1Q04837 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.73□□□□□ -0.05
SSBP1Q04837 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSBP1Q04837 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSBP1Q04837 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.73□□□□□ -0.05
SSBP1Q04837 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SSBP1Q04837 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSBP1Q04837 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
SSBP1Q04837 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSBP1Q04837 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSBP1Q04837 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSBP1Q04837 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSBP1Q04837 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SSBP1Q04837 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SSBP1Q04837 MTHFR-217ENST00000641820 1569 ntBASIC14.73□□□□□ -0.05
SSBP1Q04837 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.72□□□□□ -0.05
SSBP1Q04837 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.72□□□□□ -0.05
SSBP1Q04837 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.72□□□□□ -0.05
SSBP1Q04837 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms