Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
IRX3P78415 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
IRX3P78415 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
IRX3P78415 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
IRX3P78415 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.23■□□□□ 0.83
IRX3P78415 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC20.23■□□□□ 0.83
IRX3P78415 AC010507.1-201ENST00000633895 436 ntBASIC20.23■□□□□ 0.83
IRX3P78415 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
IRX3P78415 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
IRX3P78415 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
IRX3P78415 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
IRX3P78415 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.23■□□□□ 0.83
IRX3P78415 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
IRX3P78415 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
IRX3P78415 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
IRX3P78415 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
IRX3P78415 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
IRX3P78415 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
IRX3P78415 AC139713.2-201ENST00000641328 2723 ntBASIC20.23■□□□□ 0.83
IRX3P78415 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
IRX3P78415 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
IRX3P78415 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
IRX3P78415 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC20.22■□□□□ 0.83
IRX3P78415 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IRX3P78415 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
IRX3P78415 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IRX3P78415 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
IRX3P78415 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
IRX3P78415 AP002414.1-201ENST00000391405 1147 ntBASIC20.22■□□□□ 0.83
IRX3P78415 PTCHD3P3-201ENST00000403073 906 ntBASIC20.22■□□□□ 0.83
IRX3P78415 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.22■□□□□ 0.83
IRX3P78415 DDX43P3-201ENST00000441064 443 ntBASIC20.22■□□□□ 0.83
IRX3P78415 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
IRX3P78415 CYMP-203ENST00000474680 1263 ntBASIC20.22■□□□□ 0.83
IRX3P78415 RFPL4AP1-201ENST00000530883 850 ntBASIC20.22■□□□□ 0.83
IRX3P78415 CIPC-205ENST00000555437 566 ntTSL 3 BASIC20.22■□□□□ 0.83
IRX3P78415 PDPK2P-202ENST00000562415 1191 ntBASIC20.22■□□□□ 0.83
IRX3P78415 GGTLC5P-201ENST00000617623 998 ntBASIC20.22■□□□□ 0.83
IRX3P78415 AC004877.2-201ENST00000623941 599 ntBASIC20.22■□□□□ 0.83
IRX3P78415 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IRX3P78415 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.22■□□□□ 0.83
IRX3P78415 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
IRX3P78415 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IRX3P78415 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IRX3P78415 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
IRX3P78415 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IRX3P78415 BCAR1-209ENST00000546196 1340 ntBASIC20.22■□□□□ 0.83
IRX3P78415 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IRX3P78415 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC20.22■□□□□ 0.83
IRX3P78415 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IRX3P78415 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
IRX3P78415 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
IRX3P78415 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IRX3P78415 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
IRX3P78415 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.21■□□□□ 0.83
IRX3P78415 AC009336.1-201ENST00000608941 1553 ntBASIC20.21■□□□□ 0.83
IRX3P78415 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.21■□□□□ 0.83
IRX3P78415 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
IRX3P78415 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IRX3P78415 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC20.21■□□□□ 0.83
IRX3P78415 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
IRX3P78415 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
IRX3P78415 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IRX3P78415 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IRX3P78415 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IRX3P78415 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IRX3P78415 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC20.21■□□□□ 0.83
IRX3P78415 SMN2-210ENST00000511812 867 ntTSL 2 BASIC20.21■□□□□ 0.83
IRX3P78415 AC096734.2-201ENST00000562054 433 ntBASIC20.21■□□□□ 0.83
IRX3P78415 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC20.21■□□□□ 0.83
IRX3P78415 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.21■□□□□ 0.83
IRX3P78415 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC20.21■□□□□ 0.83
IRX3P78415 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
IRX3P78415 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.21■□□□□ 0.83
IRX3P78415 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.21■□□□□ 0.83
IRX3P78415 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
IRX3P78415 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IRX3P78415 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IRX3P78415 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IRX3P78415 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
IRX3P78415 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IRX3P78415 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC20.21■□□□□ 0.83
IRX3P78415 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IRX3P78415 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
IRX3P78415 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.21■□□□□ 0.83
IRX3P78415 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
IRX3P78415 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.21■□□□□ 0.83
IRX3P78415 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
IRX3P78415 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC20.2■□□□□ 0.83
IRX3P78415 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IRX3P78415 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IRX3P78415 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IRX3P78415 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
IRX3P78415 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
IRX3P78415 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IRX3P78415 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.2■□□□□ 0.82
IRX3P78415 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.2■□□□□ 0.82
IRX3P78415 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
IRX3P78415 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC20.2■□□□□ 0.82
IRX3P78415 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms