Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
AP1S1P61966 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP1S1P61966 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
AP1S1P61966 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.51■□□□□ 0.39
AP1S1P61966 HNRNPDP1-201ENST00000439535 754 ntBASIC17.51■□□□□ 0.39
AP1S1P61966 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.51■□□□□ 0.39
AP1S1P61966 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.51■□□□□ 0.39
AP1S1P61966 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
AP1S1P61966 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.51■□□□□ 0.39
AP1S1P61966 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
AP1S1P61966 AP001005.1-201ENST00000571755 1248 ntBASIC17.51■□□□□ 0.39
AP1S1P61966 AL139424.1-201ENST00000607572 797 ntBASIC17.51■□□□□ 0.39
AP1S1P61966 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.51■□□□□ 0.39
AP1S1P61966 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
AP1S1P61966 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.51■□□□□ 0.39
AP1S1P61966 AC008735.5-201ENST00000623544 497 ntBASIC17.51■□□□□ 0.39
AP1S1P61966 FAM215A-202ENST00000632077 792 ntBASIC17.51■□□□□ 0.39
AP1S1P61966 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.51■□□□□ 0.39
AP1S1P61966 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
AP1S1P61966 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP1S1P61966 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.51■□□□□ 0.39
AP1S1P61966 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP1S1P61966 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP1S1P61966 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.51■□□□□ 0.39
AP1S1P61966 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
AP1S1P61966 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
AP1S1P61966 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
AP1S1P61966 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP1S1P61966 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
AP1S1P61966 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
AP1S1P61966 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.51■□□□□ 0.39
AP1S1P61966 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP1S1P61966 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
AP1S1P61966 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
AP1S1P61966 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.5■□□□□ 0.39
AP1S1P61966 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP1S1P61966 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
AP1S1P61966 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
AP1S1P61966 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
AP1S1P61966 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.5■□□□□ 0.39
AP1S1P61966 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP1S1P61966 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.5■□□□□ 0.39
AP1S1P61966 AC093909.1-201ENST00000504731 1122 ntBASIC17.5■□□□□ 0.39
AP1S1P61966 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.5■□□□□ 0.39
AP1S1P61966 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.5■□□□□ 0.39
AP1S1P61966 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.5■□□□□ 0.39
AP1S1P61966 AL353135.1-201ENST00000606729 504 ntBASIC17.5■□□□□ 0.39
AP1S1P61966 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.5■□□□□ 0.39
AP1S1P61966 AC004706.3-202ENST00000621574 984 ntBASIC17.5■□□□□ 0.39
AP1S1P61966 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
AP1S1P61966 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.5■□□□□ 0.39
AP1S1P61966 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.5■□□□□ 0.39
AP1S1P61966 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.5■□□□□ 0.39
AP1S1P61966 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.5■□□□□ 0.39
AP1S1P61966 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
AP1S1P61966 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP1S1P61966 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
AP1S1P61966 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP1S1P61966 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
AP1S1P61966 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
AP1S1P61966 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
AP1S1P61966 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
AP1S1P61966 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP1S1P61966 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP1S1P61966 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP1S1P61966 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
AP1S1P61966 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.49■□□□□ 0.39
AP1S1P61966 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP1S1P61966 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.49■□□□□ 0.39
AP1S1P61966 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
AP1S1P61966 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.49■□□□□ 0.39
AP1S1P61966 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
AP1S1P61966 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP1S1P61966 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
AP1S1P61966 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.49■□□□□ 0.39
AP1S1P61966 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
AP1S1P61966 RNA5SP419-201ENST00000515908 135 ntBASIC17.49■□□□□ 0.39
AP1S1P61966 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
AP1S1P61966 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.49■□□□□ 0.39
AP1S1P61966 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
AP1S1P61966 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
AP1S1P61966 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP1S1P61966 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
AP1S1P61966 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP1S1P61966 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.49■□□□□ 0.39
AP1S1P61966 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.49■□□□□ 0.39
AP1S1P61966 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
AP1S1P61966 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP1S1P61966 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
AP1S1P61966 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP1S1P61966 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
AP1S1P61966 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
AP1S1P61966 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP1S1P61966 HLA-A-201ENST00000376802 1334 ntBASIC17.48■□□□□ 0.39
AP1S1P61966 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.48■□□□□ 0.39
AP1S1P61966 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
AP1S1P61966 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP1S1P61966 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
AP1S1P61966 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP1S1P61966 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms