Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 PVRIG2P-201ENST00000435460 978 ntBASIC15.3■□□□□ 0.04
SEC61A1P61619 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SEC61A1P61619 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.3■□□□□ 0.04
SEC61A1P61619 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.3■□□□□ 0.04
SEC61A1P61619 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.3■□□□□ 0.04
SEC61A1P61619 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEC61A1P61619 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.3■□□□□ 0.04
SEC61A1P61619 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEC61A1P61619 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.3■□□□□ 0.04
SEC61A1P61619 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SEC61A1P61619 AC011498.5-201ENST00000592027 486 ntBASIC15.3■□□□□ 0.04
SEC61A1P61619 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.3■□□□□ 0.04
SEC61A1P61619 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SEC61A1P61619 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEC61A1P61619 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEC61A1P61619 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SEC61A1P61619 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.3■□□□□ 0.04
SEC61A1P61619 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SEC61A1P61619 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SEC61A1P61619 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SEC61A1P61619 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SEC61A1P61619 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SEC61A1P61619 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SEC61A1P61619 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.29■□□□□ 0.04
SEC61A1P61619 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.29■□□□□ 0.04
SEC61A1P61619 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.29■□□□□ 0.04
SEC61A1P61619 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SEC61A1P61619 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.29■□□□□ 0.04
SEC61A1P61619 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SEC61A1P61619 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SEC61A1P61619 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.29■□□□□ 0.04
SEC61A1P61619 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SEC61A1P61619 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.29■□□□□ 0.04
SEC61A1P61619 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.29■□□□□ 0.04
SEC61A1P61619 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SEC61A1P61619 MIR662-201ENST00000384847 95 ntBASIC15.29■□□□□ 0.04
SEC61A1P61619 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SEC61A1P61619 RNF126P1-202ENST00000569893 925 ntBASIC15.29■□□□□ 0.04
SEC61A1P61619 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.29■□□□□ 0.04
SEC61A1P61619 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SEC61A1P61619 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.29■□□□□ 0.04
SEC61A1P61619 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SEC61A1P61619 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SEC61A1P61619 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SEC61A1P61619 AC105020.1-201ENST00000435356 2205 ntBASIC15.29■□□□□ 0.04
SEC61A1P61619 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SEC61A1P61619 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SEC61A1P61619 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.29■□□□□ 0.04
SEC61A1P61619 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.29■□□□□ 0.04
SEC61A1P61619 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SEC61A1P61619 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SEC61A1P61619 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SEC61A1P61619 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SEC61A1P61619 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.29■□□□□ 0.04
SEC61A1P61619 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.29■□□□□ 0.04
SEC61A1P61619 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SEC61A1P61619 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SEC61A1P61619 PHGDH-209ENST00000641074 1780 ntBASIC15.29■□□□□ 0.04
SEC61A1P61619 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SEC61A1P61619 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SEC61A1P61619 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
SEC61A1P61619 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.28■□□□□ 0.04
SEC61A1P61619 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SEC61A1P61619 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SEC61A1P61619 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SEC61A1P61619 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SEC61A1P61619 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.28■□□□□ 0.04
SEC61A1P61619 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SEC61A1P61619 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SEC61A1P61619 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SEC61A1P61619 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SEC61A1P61619 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SEC61A1P61619 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SEC61A1P61619 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SEC61A1P61619 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SEC61A1P61619 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SEC61A1P61619 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SEC61A1P61619 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SEC61A1P61619 HCG4P8-203ENST00000443049 980 ntBASIC15.28■□□□□ 0.04
SEC61A1P61619 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SEC61A1P61619 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.28■□□□□ 0.04
SEC61A1P61619 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.28■□□□□ 0.04
SEC61A1P61619 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SEC61A1P61619 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SEC61A1P61619 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SEC61A1P61619 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.28■□□□□ 0.04
SEC61A1P61619 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SEC61A1P61619 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SEC61A1P61619 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.28■□□□□ 0.04
SEC61A1P61619 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SEC61A1P61619 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SEC61A1P61619 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SEC61A1P61619 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SEC61A1P61619 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
SEC61A1P61619 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SEC61A1P61619 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SEC61A1P61619 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SEC61A1P61619 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SEC61A1P61619 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SEC61A1P61619 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms