Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC110285.5-201ENST00000611501 352 ntBASIC12.27□□□□□ -0.45
CKS1BP61024 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
CKS1BP61024 AC011298.2-201ENST00000617989 482 ntBASIC12.27□□□□□ -0.45
CKS1BP61024 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC12.27□□□□□ -0.45
CKS1BP61024 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.27□□□□□ -0.45
CKS1BP61024 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CKS1BP61024 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CKS1BP61024 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
CKS1BP61024 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CKS1BP61024 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
CKS1BP61024 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC12.27□□□□□ -0.45
CKS1BP61024 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC12.27□□□□□ -0.45
CKS1BP61024 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
CKS1BP61024 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
CKS1BP61024 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
CKS1BP61024 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC12.27□□□□□ -0.45
CKS1BP61024 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
CKS1BP61024 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC12.27□□□□□ -0.45
CKS1BP61024 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CKS1BP61024 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC12.27□□□□□ -0.45
CKS1BP61024 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
CKS1BP61024 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
CKS1BP61024 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC12.26□□□□□ -0.45
CKS1BP61024 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CKS1BP61024 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
CKS1BP61024 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
CKS1BP61024 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC12.26□□□□□ -0.45
CKS1BP61024 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CKS1BP61024 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CKS1BP61024 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
CKS1BP61024 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CKS1BP61024 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CKS1BP61024 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC12.26□□□□□ -0.45
CKS1BP61024 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CKS1BP61024 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
CKS1BP61024 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC12.26□□□□□ -0.45
CKS1BP61024 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC12.26□□□□□ -0.45
CKS1BP61024 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
CKS1BP61024 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CKS1BP61024 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CKS1BP61024 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC12.26□□□□□ -0.45
CKS1BP61024 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CKS1BP61024 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CKS1BP61024 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC12.26□□□□□ -0.45
CKS1BP61024 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC12.26□□□□□ -0.45
CKS1BP61024 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CKS1BP61024 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC12.26□□□□□ -0.45
CKS1BP61024 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CKS1BP61024 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CKS1BP61024 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CKS1BP61024 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CKS1BP61024 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CKS1BP61024 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CKS1BP61024 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CKS1BP61024 AL355802.2-201ENST00000402069 882 ntBASIC12.26□□□□□ -0.45
CKS1BP61024 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CKS1BP61024 FAM207BP-201ENST00000447172 505 ntBASIC12.26□□□□□ -0.45
CKS1BP61024 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CKS1BP61024 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC12.26□□□□□ -0.45
CKS1BP61024 MNT-208ENST00000575394 606 ntTSL 4 BASIC12.26□□□□□ -0.45
CKS1BP61024 AC104771.1-201ENST00000603335 964 ntBASIC12.26□□□□□ -0.45
CKS1BP61024 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC12.26□□□□□ -0.45
CKS1BP61024 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
CKS1BP61024 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CKS1BP61024 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC12.26□□□□□ -0.45
CKS1BP61024 AL031985.4-201ENST00000642138 673 ntBASIC12.26□□□□□ -0.45
CKS1BP61024 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC12.26□□□□□ -0.45
CKS1BP61024 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
CKS1BP61024 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CKS1BP61024 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CKS1BP61024 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CKS1BP61024 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CKS1BP61024 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.26□□□□□ -0.45
CKS1BP61024 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CKS1BP61024 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC12.26□□□□□ -0.45
CKS1BP61024 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CKS1BP61024 KRT16P1-201ENST00000399124 1418 ntBASIC12.26□□□□□ -0.45
CKS1BP61024 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CKS1BP61024 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CKS1BP61024 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CKS1BP61024 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CKS1BP61024 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
CKS1BP61024 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CKS1BP61024 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CKS1BP61024 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CKS1BP61024 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CKS1BP61024 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CKS1BP61024 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC12.25□□□□□ -0.45
CKS1BP61024 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
CKS1BP61024 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
CKS1BP61024 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC12.25□□□□□ -0.45
CKS1BP61024 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CKS1BP61024 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
CKS1BP61024 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CKS1BP61024 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CKS1BP61024 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CKS1BP61024 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CKS1BP61024 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CKS1BP61024 GNE-204ENST00000539208 2190 ntTSL 2 BASIC12.25□□□□□ -0.45
CKS1BP61024 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms