Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDC42P60953 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CDC42P60953 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CDC42P60953 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDC42P60953 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDC42P60953 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDC42P60953 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDC42P60953 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDC42P60953 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDC42P60953 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDC42P60953 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDC42P60953 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDC42P60953 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.95■□□□□ 0.14
CDC42P60953 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.95■□□□□ 0.14
CDC42P60953 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.95■□□□□ 0.14
CDC42P60953 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC15.95■□□□□ 0.14
CDC42P60953 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC15.95■□□□□ 0.14
CDC42P60953 AC026471.5-201ENST00000615068 467 ntBASIC15.95■□□□□ 0.14
CDC42P60953 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDC42P60953 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CDC42P60953 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15.95■□□□□ 0.14
CDC42P60953 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CDC42P60953 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.95■□□□□ 0.14
CDC42P60953 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.95■□□□□ 0.14
CDC42P60953 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
CDC42P60953 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.95■□□□□ 0.14
CDC42P60953 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDC42P60953 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDC42P60953 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDC42P60953 CICP6-201ENST00000457191 2729 ntBASIC15.95■□□□□ 0.14
CDC42P60953 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.95■□□□□ 0.14
CDC42P60953 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDC42P60953 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDC42P60953 AC063926.3-201ENST00000624734 5658 ntBASIC15.94■□□□□ 0.14
CDC42P60953 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDC42P60953 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.94■□□□□ 0.14
CDC42P60953 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDC42P60953 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CDC42P60953 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CDC42P60953 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.94■□□□□ 0.14
CDC42P60953 AL162727.3-201ENST00000635661 2787 ntBASIC15.94■□□□□ 0.14
CDC42P60953 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDC42P60953 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDC42P60953 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
CDC42P60953 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
CDC42P60953 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDC42P60953 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDC42P60953 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDC42P60953 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDC42P60953 AC012618.2-201ENST00000428058 849 ntBASIC15.94■□□□□ 0.14
CDC42P60953 TSPY20P-201ENST00000450910 630 ntBASIC15.94■□□□□ 0.14
CDC42P60953 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDC42P60953 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC15.94■□□□□ 0.14
CDC42P60953 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC15.94■□□□□ 0.14
CDC42P60953 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC15.94■□□□□ 0.14
CDC42P60953 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDC42P60953 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.94■□□□□ 0.14
CDC42P60953 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.94■□□□□ 0.14
CDC42P60953 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDC42P60953 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.94■□□□□ 0.14
CDC42P60953 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CDC42P60953 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.94■□□□□ 0.14
CDC42P60953 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDC42P60953 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.94■□□□□ 0.14
CDC42P60953 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDC42P60953 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDC42P60953 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDC42P60953 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDC42P60953 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.94■□□□□ 0.14
CDC42P60953 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDC42P60953 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDC42P60953 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDC42P60953 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CDC42P60953 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDC42P60953 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC15.94■□□□□ 0.14
CDC42P60953 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.93■□□□□ 0.14
CDC42P60953 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDC42P60953 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDC42P60953 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.93■□□□□ 0.14
CDC42P60953 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
CDC42P60953 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CDC42P60953 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDC42P60953 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDC42P60953 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.93■□□□□ 0.14
CDC42P60953 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDC42P60953 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDC42P60953 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDC42P60953 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDC42P60953 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDC42P60953 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.93■□□□□ 0.14
CDC42P60953 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.93■□□□□ 0.14
CDC42P60953 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDC42P60953 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDC42P60953 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDC42P60953 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
CDC42P60953 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDC42P60953 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
CDC42P60953 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDC42P60953 C2orf69P3-201ENST00000565542 1120 ntBASIC15.93■□□□□ 0.14
CDC42P60953 AL049637.2-201ENST00000641778 930 ntBASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms