Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
SMIM11AP58511 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
SMIM11AP58511 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.08■□□□□ 0.16
SMIM11AP58511 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SMIM11AP58511 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.08■□□□□ 0.16
SMIM11AP58511 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMIM11AP58511 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.08■□□□□ 0.16
SMIM11AP58511 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMIM11AP58511 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMIM11AP58511 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.08■□□□□ 0.16
SMIM11AP58511 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMIM11AP58511 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.08■□□□□ 0.16
SMIM11AP58511 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMIM11AP58511 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SMIM11AP58511 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMIM11AP58511 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMIM11AP58511 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMIM11AP58511 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMIM11AP58511 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
SMIM11AP58511 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMIM11AP58511 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
SMIM11AP58511 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.07■□□□□ 0.16
SMIM11AP58511 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMIM11AP58511 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SMIM11AP58511 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SMIM11AP58511 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
SMIM11AP58511 STARP1-201ENST00000397973 869 ntBASIC16.07■□□□□ 0.16
SMIM11AP58511 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.07■□□□□ 0.16
SMIM11AP58511 LIN28AP1-201ENST00000429574 405 ntBASIC16.07■□□□□ 0.16
SMIM11AP58511 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.07■□□□□ 0.16
SMIM11AP58511 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.07■□□□□ 0.16
SMIM11AP58511 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMIM11AP58511 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.07■□□□□ 0.16
SMIM11AP58511 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.07■□□□□ 0.16
SMIM11AP58511 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SMIM11AP58511 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMIM11AP58511 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SMIM11AP58511 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.07■□□□□ 0.16
SMIM11AP58511 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMIM11AP58511 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.07■□□□□ 0.16
SMIM11AP58511 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
SMIM11AP58511 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SMIM11AP58511 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.07■□□□□ 0.16
SMIM11AP58511 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.07■□□□□ 0.16
SMIM11AP58511 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMIM11AP58511 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SMIM11AP58511 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMIM11AP58511 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMIM11AP58511 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMIM11AP58511 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SMIM11AP58511 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
SMIM11AP58511 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SMIM11AP58511 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.07■□□□□ 0.16
SMIM11AP58511 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMIM11AP58511 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SMIM11AP58511 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.06■□□□□ 0.16
SMIM11AP58511 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMIM11AP58511 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.06■□□□□ 0.16
SMIM11AP58511 AC105020.1-201ENST00000435356 2205 ntBASIC16.06■□□□□ 0.16
SMIM11AP58511 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMIM11AP58511 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.06■□□□□ 0.16
SMIM11AP58511 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SMIM11AP58511 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMIM11AP58511 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMIM11AP58511 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SMIM11AP58511 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.06■□□□□ 0.16
SMIM11AP58511 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMIM11AP58511 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMIM11AP58511 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMIM11AP58511 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
SMIM11AP58511 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMIM11AP58511 COX11P1-201ENST00000489116 835 ntBASIC16.06■□□□□ 0.16
SMIM11AP58511 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.06■□□□□ 0.16
SMIM11AP58511 GPR32P1-201ENST00000601788 811 ntBASIC16.06■□□□□ 0.16
SMIM11AP58511 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.06■□□□□ 0.16
SMIM11AP58511 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMIM11AP58511 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SMIM11AP58511 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SMIM11AP58511 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMIM11AP58511 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.06■□□□□ 0.16
SMIM11AP58511 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMIM11AP58511 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SMIM11AP58511 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMIM11AP58511 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SMIM11AP58511 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM11AP58511 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM11AP58511 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.05■□□□□ 0.16
SMIM11AP58511 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SMIM11AP58511 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM11AP58511 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.05■□□□□ 0.16
SMIM11AP58511 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.05■□□□□ 0.16
SMIM11AP58511 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SMIM11AP58511 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM11AP58511 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM11AP58511 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.05■□□□□ 0.16
SMIM11AP58511 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM11AP58511 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.05■□□□□ 0.16
SMIM11AP58511 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM11AP58511 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM11AP58511 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms