Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.17■□□□□ 0.66
PEX3P56589 RNA5SP419-201ENST00000515908 135 ntBASIC19.17■□□□□ 0.66
PEX3P56589 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.17■□□□□ 0.66
PEX3P56589 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.17■□□□□ 0.66
PEX3P56589 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.17■□□□□ 0.66
PEX3P56589 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.17■□□□□ 0.66
PEX3P56589 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.17■□□□□ 0.66
PEX3P56589 AC107918.4-202ENST00000641623 219 ntBASIC19.17■□□□□ 0.66
PEX3P56589 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PEX3P56589 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.17■□□□□ 0.66
PEX3P56589 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.17■□□□□ 0.66
PEX3P56589 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PEX3P56589 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PEX3P56589 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PEX3P56589 HLA-A-201ENST00000376802 1334 ntBASIC19.17■□□□□ 0.66
PEX3P56589 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PEX3P56589 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.17■□□□□ 0.66
PEX3P56589 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PEX3P56589 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.17■□□□□ 0.66
PEX3P56589 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PEX3P56589 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PEX3P56589 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.17■□□□□ 0.66
PEX3P56589 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PEX3P56589 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.17■□□□□ 0.66
PEX3P56589 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.16■□□□□ 0.66
PEX3P56589 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.16■□□□□ 0.66
PEX3P56589 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PEX3P56589 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PEX3P56589 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PEX3P56589 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PEX3P56589 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.16■□□□□ 0.66
PEX3P56589 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PEX3P56589 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PEX3P56589 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PEX3P56589 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PEX3P56589 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PEX3P56589 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PEX3P56589 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.16■□□□□ 0.66
PEX3P56589 AP001005.1-201ENST00000571755 1248 ntBASIC19.16■□□□□ 0.66
PEX3P56589 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.16■□□□□ 0.66
PEX3P56589 AL049840.3-201ENST00000602669 611 ntBASIC19.16■□□□□ 0.66
PEX3P56589 FAM215A-202ENST00000632077 792 ntBASIC19.16■□□□□ 0.66
PEX3P56589 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.16■□□□□ 0.66
PEX3P56589 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PEX3P56589 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PEX3P56589 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.16■□□□□ 0.66
PEX3P56589 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PEX3P56589 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PEX3P56589 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PEX3P56589 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PEX3P56589 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PEX3P56589 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PEX3P56589 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PEX3P56589 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PEX3P56589 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.15■□□□□ 0.66
PEX3P56589 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PEX3P56589 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PEX3P56589 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PEX3P56589 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PEX3P56589 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PEX3P56589 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PEX3P56589 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.15■□□□□ 0.66
PEX3P56589 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.15■□□□□ 0.66
PEX3P56589 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.15■□□□□ 0.66
PEX3P56589 AC139887.3-201ENST00000568585 713 ntBASIC19.15■□□□□ 0.66
PEX3P56589 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.15■□□□□ 0.66
PEX3P56589 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PEX3P56589 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.15■□□□□ 0.66
PEX3P56589 AL589182.2-201ENST00000619332 1049 ntBASIC19.15■□□□□ 0.66
PEX3P56589 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PEX3P56589 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PEX3P56589 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PEX3P56589 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PEX3P56589 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PEX3P56589 CROCCP2-202ENST00000412962 2773 ntBASIC19.15■□□□□ 0.66
PEX3P56589 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PEX3P56589 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PEX3P56589 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PEX3P56589 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PEX3P56589 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
PEX3P56589 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PEX3P56589 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PEX3P56589 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PEX3P56589 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PEX3P56589 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.14■□□□□ 0.65
PEX3P56589 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.14■□□□□ 0.65
PEX3P56589 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.14■□□□□ 0.65
PEX3P56589 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
PEX3P56589 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.14■□□□□ 0.65
PEX3P56589 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PEX3P56589 LINC00982-205ENST00000420957 435 ntBASIC19.14■□□□□ 0.65
PEX3P56589 LAGE3P1-201ENST00000425356 484 ntBASIC19.14■□□□□ 0.65
PEX3P56589 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PEX3P56589 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.14■□□□□ 0.65
PEX3P56589 AC079776.4-201ENST00000511039 504 ntBASIC19.14■□□□□ 0.65
PEX3P56589 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.14■□□□□ 0.65
PEX3P56589 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.14■□□□□ 0.65
PEX3P56589 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
PEX3P56589 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.14■□□□□ 0.65
PEX3P56589 AC012640.2-201ENST00000561606 901 ntBASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms