Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.1■□□□□ 0.65
ATN1P54259 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATN1P54259 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
ATN1P54259 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.09■□□□□ 0.65
ATN1P54259 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
ATN1P54259 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.09■□□□□ 0.65
ATN1P54259 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATN1P54259 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
ATN1P54259 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ATN1P54259 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATN1P54259 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATN1P54259 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATN1P54259 GOLGA6L11P-201ENST00000417252 1298 ntBASIC19.09■□□□□ 0.65
ATN1P54259 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC19.09■□□□□ 0.65
ATN1P54259 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC19.09■□□□□ 0.65
ATN1P54259 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC19.09■□□□□ 0.65
ATN1P54259 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.09■□□□□ 0.65
ATN1P54259 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC19.09■□□□□ 0.65
ATN1P54259 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC19.09■□□□□ 0.65
ATN1P54259 COX11-202ENST00000571584 1108 ntTSL 2 BASIC19.09■□□□□ 0.65
ATN1P54259 HFE2-206ENST00000634927 506 ntTSL 4 BASIC19.09■□□□□ 0.65
ATN1P54259 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.09■□□□□ 0.65
ATN1P54259 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATN1P54259 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ATN1P54259 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATN1P54259 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
ATN1P54259 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATN1P54259 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.09■□□□□ 0.65
ATN1P54259 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.09■□□□□ 0.65
ATN1P54259 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATN1P54259 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
ATN1P54259 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATN1P54259 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ATN1P54259 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.08■□□□□ 0.65
ATN1P54259 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ATN1P54259 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
ATN1P54259 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ATN1P54259 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
ATN1P54259 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ATN1P54259 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.08■□□□□ 0.65
ATN1P54259 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ATN1P54259 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ATN1P54259 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATN1P54259 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
ATN1P54259 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC19.08■□□□□ 0.64
ATN1P54259 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.08■□□□□ 0.64
ATN1P54259 AC002558.1-201ENST00000488906 803 ntBASIC19.08■□□□□ 0.64
ATN1P54259 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19.08■□□□□ 0.64
ATN1P54259 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC19.08■□□□□ 0.64
ATN1P54259 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
ATN1P54259 AC140878.1-201ENST00000565277 250 ntBASIC19.08■□□□□ 0.64
ATN1P54259 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ATN1P54259 AC004223.2-201ENST00000590309 544 ntBASIC19.08■□□□□ 0.64
ATN1P54259 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATN1P54259 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.08■□□□□ 0.64
ATN1P54259 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC19.08■□□□□ 0.64
ATN1P54259 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.08■□□□□ 0.64
ATN1P54259 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
ATN1P54259 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATN1P54259 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATN1P54259 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.08■□□□□ 0.64
ATN1P54259 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ATN1P54259 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.08■□□□□ 0.64
ATN1P54259 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATN1P54259 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.08■□□□□ 0.64
ATN1P54259 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATN1P54259 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.08■□□□□ 0.64
ATN1P54259 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATN1P54259 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATN1P54259 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATN1P54259 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ATN1P54259 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATN1P54259 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.07■□□□□ 0.64
ATN1P54259 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.07■□□□□ 0.64
ATN1P54259 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATN1P54259 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.07■□□□□ 0.64
ATN1P54259 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATN1P54259 MYCLP1-201ENST00000372451 1075 ntBASIC19.07■□□□□ 0.64
ATN1P54259 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ATN1P54259 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.07■□□□□ 0.64
ATN1P54259 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.07■□□□□ 0.64
ATN1P54259 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.07■□□□□ 0.64
ATN1P54259 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.07■□□□□ 0.64
ATN1P54259 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.07■□□□□ 0.64
ATN1P54259 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
ATN1P54259 AL133445.2-201ENST00000611191 527 ntBASIC19.07■□□□□ 0.64
ATN1P54259 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATN1P54259 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.07■□□□□ 0.64
ATN1P54259 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ATN1P54259 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.07■□□□□ 0.64
ATN1P54259 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.07■□□□□ 0.64
ATN1P54259 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATN1P54259 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.07■□□□□ 0.64
ATN1P54259 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
ATN1P54259 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATN1P54259 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ATN1P54259 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
ATN1P54259 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATN1P54259 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATN1P54259 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms