Protein–RNA interactions for Protein: P52799

EFNB2, Ephrin-B2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB2P52799 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
EFNB2P52799 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
EFNB2P52799 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
EFNB2P52799 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.09■□□□□ 0.01
EFNB2P52799 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
EFNB2P52799 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
EFNB2P52799 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.09■□□□□ 0.01
EFNB2P52799 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
EFNB2P52799 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.09■□□□□ 0.01
EFNB2P52799 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
EFNB2P52799 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
EFNB2P52799 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
EFNB2P52799 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
EFNB2P52799 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
EFNB2P52799 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
EFNB2P52799 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.09■□□□□ 0.01
EFNB2P52799 AL162727.3-201ENST00000635661 2787 ntBASIC15.08■□□□□ 0.01
EFNB2P52799 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.08■□□□□ 0.01
EFNB2P52799 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
EFNB2P52799 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
EFNB2P52799 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
EFNB2P52799 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
EFNB2P52799 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.08■□□□□ 0
EFNB2P52799 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.08■□□□□ 0
EFNB2P52799 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.08■□□□□ 0
EFNB2P52799 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
EFNB2P52799 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
EFNB2P52799 AC005104.2-201ENST00000427818 678 ntBASIC15.08■□□□□ 0
EFNB2P52799 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.08■□□□□ 0
EFNB2P52799 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.08■□□□□ 0
EFNB2P52799 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.08■□□□□ 0
EFNB2P52799 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
EFNB2P52799 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
EFNB2P52799 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
EFNB2P52799 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
EFNB2P52799 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.08■□□□□ 0
EFNB2P52799 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
EFNB2P52799 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.08■□□□□ 0
EFNB2P52799 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.08■□□□□ 0
EFNB2P52799 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
EFNB2P52799 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.08■□□□□ 0
EFNB2P52799 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
EFNB2P52799 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.08■□□□□ 0
EFNB2P52799 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.08■□□□□ 0
EFNB2P52799 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.08■□□□□ 0
EFNB2P52799 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
EFNB2P52799 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
EFNB2P52799 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
EFNB2P52799 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
EFNB2P52799 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
EFNB2P52799 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
EFNB2P52799 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
EFNB2P52799 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
EFNB2P52799 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.07■□□□□ 0
EFNB2P52799 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
EFNB2P52799 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
EFNB2P52799 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.07■□□□□ 0
EFNB2P52799 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.07■□□□□ 0
EFNB2P52799 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
EFNB2P52799 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
EFNB2P52799 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
EFNB2P52799 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.07■□□□□ 0
EFNB2P52799 LINC02012-201ENST00000608206 1725 ntBASIC15.07■□□□□ 0
EFNB2P52799 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
EFNB2P52799 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
EFNB2P52799 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.07■□□□□ 0
EFNB2P52799 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.07■□□□□ 0
EFNB2P52799 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.07■□□□□ 0
EFNB2P52799 SLC25A1P3-201ENST00000395415 828 ntBASIC15.07■□□□□ 0
EFNB2P52799 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.07■□□□□ 0
EFNB2P52799 TSPY5P-201ENST00000426936 936 ntBASIC15.07■□□□□ 0
EFNB2P52799 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.07■□□□□ 0
EFNB2P52799 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC15.07■□□□□ 0
EFNB2P52799 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.07■□□□□ 0
EFNB2P52799 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
EFNB2P52799 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.07■□□□□ 0
EFNB2P52799 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.07■□□□□ 0
EFNB2P52799 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.07■□□□□ 0
EFNB2P52799 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
EFNB2P52799 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.07■□□□□ 0
EFNB2P52799 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
EFNB2P52799 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
EFNB2P52799 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
EFNB2P52799 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
EFNB2P52799 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
EFNB2P52799 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.07■□□□□ 0
EFNB2P52799 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
EFNB2P52799 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
EFNB2P52799 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.06■□□□□ 0
EFNB2P52799 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.06■□□□□ 0
EFNB2P52799 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.06■□□□□ 0
EFNB2P52799 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.06■□□□□ 0
EFNB2P52799 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
EFNB2P52799 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
EFNB2P52799 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
EFNB2P52799 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.06■□□□□ 0
EFNB2P52799 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
EFNB2P52799 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.06■□□□□ 0
EFNB2P52799 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
EFNB2P52799 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms