Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC11.1□□□□□ -0.63
UBE2AP49459 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
UBE2AP49459 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC11.09□□□□□ -0.63
UBE2AP49459 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2AP49459 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC11.09□□□□□ -0.63
UBE2AP49459 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2AP49459 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2AP49459 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2AP49459 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2AP49459 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2AP49459 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2AP49459 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC11.09□□□□□ -0.63
UBE2AP49459 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
UBE2AP49459 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2AP49459 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2AP49459 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2AP49459 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2AP49459 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2AP49459 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2AP49459 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
UBE2AP49459 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC11.09□□□□□ -0.63
UBE2AP49459 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2AP49459 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2AP49459 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC11.09□□□□□ -0.63
UBE2AP49459 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2AP49459 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2AP49459 AL391807.1-203ENST00000604392 2365 ntBASIC11.09□□□□□ -0.63
UBE2AP49459 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2AP49459 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC11.09□□□□□ -0.63
UBE2AP49459 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC11.09□□□□□ -0.63
UBE2AP49459 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2AP49459 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
UBE2AP49459 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2AP49459 TERF1P1-201ENST00000311003 1181 ntBASIC11.09□□□□□ -0.63
UBE2AP49459 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2AP49459 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2AP49459 HOMER2P1-201ENST00000455653 964 ntBASIC11.09□□□□□ -0.63
UBE2AP49459 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
UBE2AP49459 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2AP49459 AC113404.2-201ENST00000507884 177 ntBASIC11.09□□□□□ -0.63
UBE2AP49459 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
UBE2AP49459 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC11.09□□□□□ -0.63
UBE2AP49459 AC139887.4-201ENST00000607877 719 ntBASIC11.09□□□□□ -0.63
UBE2AP49459 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2AP49459 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2AP49459 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2AP49459 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC11.09□□□□□ -0.63
UBE2AP49459 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2AP49459 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2AP49459 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2AP49459 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC11.09□□□□□ -0.63
UBE2AP49459 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
UBE2AP49459 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
UBE2AP49459 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.63
UBE2AP49459 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC11.08□□□□□ -0.64
UBE2AP49459 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2AP49459 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
UBE2AP49459 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2AP49459 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2AP49459 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2AP49459 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC11.08□□□□□ -0.64
UBE2AP49459 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2AP49459 KRT89P-201ENST00000620027 1478 ntBASIC11.08□□□□□ -0.64
UBE2AP49459 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC11.08□□□□□ -0.64
UBE2AP49459 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2AP49459 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2AP49459 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC11.08□□□□□ -0.64
UBE2AP49459 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2AP49459 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2AP49459 AC005521.1-201ENST00000393351 872 ntBASIC11.08□□□□□ -0.64
UBE2AP49459 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2AP49459 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC11.08□□□□□ -0.64
UBE2AP49459 DDT-203ENST00000403754 569 ntTSL 3 BASIC11.08□□□□□ -0.64
UBE2AP49459 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2AP49459 DDT-206ENST00000430101 573 ntTSL 2 BASIC11.08□□□□□ -0.64
UBE2AP49459 KRT18P65-201ENST00000439811 1286 ntBASIC11.08□□□□□ -0.64
UBE2AP49459 KRT18P57-201ENST00000443599 1254 ntBASIC11.08□□□□□ -0.64
UBE2AP49459 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC11.08□□□□□ -0.64
UBE2AP49459 YBX1P2-201ENST00000489612 999 ntBASIC11.08□□□□□ -0.64
UBE2AP49459 AP003733.1-201ENST00000491725 852 ntBASIC11.08□□□□□ -0.64
UBE2AP49459 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2AP49459 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
UBE2AP49459 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC11.08□□□□□ -0.64
UBE2AP49459 PPOX-214ENST00000535223 664 ntTSL 3 BASIC11.08□□□□□ -0.64
UBE2AP49459 AL441883.1-201ENST00000566170 1045 ntBASIC11.08□□□□□ -0.64
UBE2AP49459 LINC01238-205ENST00000567549 1107 ntBASIC11.08□□□□□ -0.64
UBE2AP49459 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC11.08□□□□□ -0.64
UBE2AP49459 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC11.08□□□□□ -0.64
UBE2AP49459 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC11.08□□□□□ -0.64
UBE2AP49459 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
UBE2AP49459 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC11.08□□□□□ -0.64
UBE2AP49459 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC11.08□□□□□ -0.64
UBE2AP49459 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2AP49459 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2AP49459 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2AP49459 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2AP49459 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2AP49459 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
UBE2AP49459 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UBE2AP49459 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms