Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
GABRA4P48169 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.47■□□□□ 0.23
GABRA4P48169 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.46■□□□□ 0.23
GABRA4P48169 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.46■□□□□ 0.23
GABRA4P48169 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GABRA4P48169 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
GABRA4P48169 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
GABRA4P48169 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
GABRA4P48169 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
GABRA4P48169 KRT18P3-201ENST00000451602 1288 ntBASIC16.46■□□□□ 0.23
GABRA4P48169 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.46■□□□□ 0.23
GABRA4P48169 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.46■□□□□ 0.23
GABRA4P48169 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.46■□□□□ 0.23
GABRA4P48169 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
GABRA4P48169 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.46■□□□□ 0.23
GABRA4P48169 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
GABRA4P48169 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GABRA4P48169 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GABRA4P48169 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.46■□□□□ 0.23
GABRA4P48169 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GABRA4P48169 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.46■□□□□ 0.23
GABRA4P48169 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GABRA4P48169 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
GABRA4P48169 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
GABRA4P48169 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
GABRA4P48169 GNAS-203ENST00000306120 1878 ntBASIC16.46■□□□□ 0.22
GABRA4P48169 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
GABRA4P48169 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
GABRA4P48169 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.46■□□□□ 0.22
GABRA4P48169 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GABRA4P48169 PMS2P7-201ENST00000506558 1336 ntBASIC16.45■□□□□ 0.22
GABRA4P48169 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GABRA4P48169 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.45■□□□□ 0.22
GABRA4P48169 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GABRA4P48169 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GABRA4P48169 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GABRA4P48169 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GABRA4P48169 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GABRA4P48169 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GABRA4P48169 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GABRA4P48169 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GABRA4P48169 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
GABRA4P48169 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
GABRA4P48169 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.45■□□□□ 0.22
GABRA4P48169 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GABRA4P48169 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GABRA4P48169 MIR940-201ENST00000401276 94 ntBASIC16.45■□□□□ 0.22
GABRA4P48169 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.45■□□□□ 0.22
GABRA4P48169 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.45■□□□□ 0.22
GABRA4P48169 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.45■□□□□ 0.22
GABRA4P48169 AC007967.2-201ENST00000432613 625 ntBASIC16.45■□□□□ 0.22
GABRA4P48169 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
GABRA4P48169 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.45■□□□□ 0.22
GABRA4P48169 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.45■□□□□ 0.22
GABRA4P48169 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.45■□□□□ 0.22
GABRA4P48169 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.45■□□□□ 0.22
GABRA4P48169 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.45■□□□□ 0.22
GABRA4P48169 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.45■□□□□ 0.22
GABRA4P48169 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
GABRA4P48169 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
GABRA4P48169 AC004790.2-201ENST00000623588 572 ntBASIC16.45■□□□□ 0.22
GABRA4P48169 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.45■□□□□ 0.22
GABRA4P48169 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
GABRA4P48169 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.45■□□□□ 0.22
GABRA4P48169 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.45■□□□□ 0.22
GABRA4P48169 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.45■□□□□ 0.22
GABRA4P48169 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
GABRA4P48169 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
GABRA4P48169 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
GABRA4P48169 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GABRA4P48169 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GABRA4P48169 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GABRA4P48169 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GABRA4P48169 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GABRA4P48169 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
GABRA4P48169 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
GABRA4P48169 AC068880.1-201ENST00000507289 2297 ntBASIC16.44■□□□□ 0.22
GABRA4P48169 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.44■□□□□ 0.22
GABRA4P48169 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GABRA4P48169 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GABRA4P48169 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GABRA4P48169 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
GABRA4P48169 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GABRA4P48169 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GABRA4P48169 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GABRA4P48169 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
GABRA4P48169 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
GABRA4P48169 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
GABRA4P48169 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.44■□□□□ 0.22
GABRA4P48169 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
GABRA4P48169 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
GABRA4P48169 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
GABRA4P48169 PRSS29P-201ENST00000440800 595 ntBASIC16.44■□□□□ 0.22
GABRA4P48169 KRT18P2-201ENST00000447938 1258 ntBASIC16.44■□□□□ 0.22
GABRA4P48169 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.44■□□□□ 0.22
GABRA4P48169 OR7E47P-204ENST00000575924 449 ntBASIC16.44■□□□□ 0.22
GABRA4P48169 AC064836.3-201ENST00000607928 673 ntBASIC16.44■□□□□ 0.22
GABRA4P48169 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.44■□□□□ 0.22
GABRA4P48169 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
GABRA4P48169 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms