Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.79■□□□□ 0.28
SLC6A12P48065 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SLC6A12P48065 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SLC6A12P48065 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC6A12P48065 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SLC6A12P48065 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC6A12P48065 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.79■□□□□ 0.28
SLC6A12P48065 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.79■□□□□ 0.28
SLC6A12P48065 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC6A12P48065 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SLC6A12P48065 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC6A12P48065 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC6A12P48065 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC6A12P48065 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC6A12P48065 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SLC6A12P48065 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC6A12P48065 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC6A12P48065 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC6A12P48065 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC6A12P48065 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC6A12P48065 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SLC6A12P48065 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC6A12P48065 AC132008.2-207ENST00000454517 770 ntBASIC16.78■□□□□ 0.28
SLC6A12P48065 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC6A12P48065 MIR3652-201ENST00000579335 131 ntBASIC16.78■□□□□ 0.28
SLC6A12P48065 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC6A12P48065 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC6A12P48065 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC6A12P48065 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC6A12P48065 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC6A12P48065 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.78■□□□□ 0.28
SLC6A12P48065 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC6A12P48065 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SLC6A12P48065 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC6A12P48065 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SLC6A12P48065 AC009053.2-201ENST00000563701 2365 ntBASIC16.78■□□□□ 0.28
SLC6A12P48065 AP005117.1-201ENST00000584346 1413 ntBASIC16.78■□□□□ 0.28
SLC6A12P48065 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SLC6A12P48065 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC6A12P48065 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SLC6A12P48065 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.77■□□□□ 0.28
SLC6A12P48065 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC6A12P48065 AC090340.1-201ENST00000620778 4980 ntBASIC16.77■□□□□ 0.28
SLC6A12P48065 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SLC6A12P48065 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC6A12P48065 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC6A12P48065 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC6A12P48065 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC6A12P48065 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
SLC6A12P48065 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC6A12P48065 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SLC6A12P48065 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.77■□□□□ 0.28
SLC6A12P48065 AC106795.1-205ENST00000512851 1056 ntBASIC16.77■□□□□ 0.28
SLC6A12P48065 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.77■□□□□ 0.28
SLC6A12P48065 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.77■□□□□ 0.28
SLC6A12P48065 AC124947.2-201ENST00000547118 1133 ntBASIC16.77■□□□□ 0.28
SLC6A12P48065 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.77■□□□□ 0.28
SLC6A12P48065 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.77■□□□□ 0.28
SLC6A12P48065 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC6A12P48065 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.77■□□□□ 0.28
SLC6A12P48065 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.77■□□□□ 0.28
SLC6A12P48065 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC6A12P48065 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC6A12P48065 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC6A12P48065 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC6A12P48065 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
SLC6A12P48065 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
SLC6A12P48065 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SLC6A12P48065 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC6A12P48065 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC6A12P48065 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC6A12P48065 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC6A12P48065 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.77■□□□□ 0.27
SLC6A12P48065 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SLC6A12P48065 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC6A12P48065 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC6A12P48065 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC6A12P48065 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC6A12P48065 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC6A12P48065 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC6A12P48065 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC6A12P48065 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC6A12P48065 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC6A12P48065 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.76■□□□□ 0.27
SLC6A12P48065 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
SLC6A12P48065 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC6A12P48065 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC6A12P48065 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.76■□□□□ 0.27
SLC6A12P48065 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC6A12P48065 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC6A12P48065 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC6A12P48065 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.76■□□□□ 0.27
SLC6A12P48065 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.76■□□□□ 0.27
SLC6A12P48065 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.76■□□□□ 0.27
SLC6A12P48065 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.76■□□□□ 0.27
SLC6A12P48065 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC6A12P48065 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC6A12P48065 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC6A12P48065 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SLC6A12P48065 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms