Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.13■□□□□ 0.17
HTR3AP46098 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HTR3AP46098 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.13■□□□□ 0.17
HTR3AP46098 AC091076.1-201ENST00000610741 619 ntBASIC16.13■□□□□ 0.17
HTR3AP46098 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HTR3AP46098 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HTR3AP46098 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
HTR3AP46098 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.13■□□□□ 0.17
HTR3AP46098 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HTR3AP46098 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
HTR3AP46098 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
HTR3AP46098 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
HTR3AP46098 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HTR3AP46098 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
HTR3AP46098 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HTR3AP46098 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
HTR3AP46098 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HTR3AP46098 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HTR3AP46098 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
HTR3AP46098 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HTR3AP46098 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HTR3AP46098 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HTR3AP46098 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.12■□□□□ 0.17
HTR3AP46098 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.12■□□□□ 0.17
HTR3AP46098 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HTR3AP46098 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.12■□□□□ 0.17
HTR3AP46098 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HTR3AP46098 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.12■□□□□ 0.17
HTR3AP46098 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HTR3AP46098 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.12■□□□□ 0.17
HTR3AP46098 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HTR3AP46098 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HTR3AP46098 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.12■□□□□ 0.17
HTR3AP46098 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
HTR3AP46098 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
HTR3AP46098 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HTR3AP46098 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HTR3AP46098 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HTR3AP46098 ARMC10P1-201ENST00000313754 855 ntBASIC16.12■□□□□ 0.17
HTR3AP46098 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.12■□□□□ 0.17
HTR3AP46098 MIR1224-201ENST00000408193 85 ntBASIC16.12■□□□□ 0.17
HTR3AP46098 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HTR3AP46098 TSSC2-201ENST00000450217 709 ntBASIC16.12■□□□□ 0.17
HTR3AP46098 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.12■□□□□ 0.17
HTR3AP46098 KRT18P35-201ENST00000510488 1269 ntBASIC16.12■□□□□ 0.17
HTR3AP46098 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.12■□□□□ 0.17
HTR3AP46098 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HTR3AP46098 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.12■□□□□ 0.17
HTR3AP46098 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.12■□□□□ 0.17
HTR3AP46098 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HTR3AP46098 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HTR3AP46098 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
HTR3AP46098 AC010331.1-201ENST00000611423 582 ntBASIC16.12■□□□□ 0.17
HTR3AP46098 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
HTR3AP46098 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
HTR3AP46098 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HTR3AP46098 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HTR3AP46098 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.12■□□□□ 0.17
HTR3AP46098 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.12■□□□□ 0.17
HTR3AP46098 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HTR3AP46098 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HTR3AP46098 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HTR3AP46098 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
HTR3AP46098 AC016734.2-201ENST00000624325 1377 ntBASIC16.12■□□□□ 0.17
HTR3AP46098 AC133963.1-201ENST00000504166 1679 ntBASIC16.11■□□□□ 0.17
HTR3AP46098 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
HTR3AP46098 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HTR3AP46098 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.11■□□□□ 0.17
HTR3AP46098 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HTR3AP46098 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HTR3AP46098 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.11■□□□□ 0.17
HTR3AP46098 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
HTR3AP46098 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HTR3AP46098 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HTR3AP46098 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HTR3AP46098 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HTR3AP46098 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.11■□□□□ 0.17
HTR3AP46098 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HTR3AP46098 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
HTR3AP46098 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.11■□□□□ 0.17
HTR3AP46098 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.11■□□□□ 0.17
HTR3AP46098 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.11■□□□□ 0.17
HTR3AP46098 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.11■□□□□ 0.17
HTR3AP46098 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HTR3AP46098 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HTR3AP46098 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HTR3AP46098 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.11■□□□□ 0.17
HTR3AP46098 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HTR3AP46098 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
HTR3AP46098 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HTR3AP46098 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HTR3AP46098 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.11■□□□□ 0.17
HTR3AP46098 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
HTR3AP46098 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HTR3AP46098 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
HTR3AP46098 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.1■□□□□ 0.17
HTR3AP46098 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
HTR3AP46098 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HTR3AP46098 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HTR3AP46098 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms