Protein–RNA interactions for Protein: P42766

RPL35, 60S ribosomal protein L35, humanhuman

Known RBP Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35P42766 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RPL35P42766 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RPL35P42766 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RPL35P42766 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC14.09□□□□□ -0.15
RPL35P42766 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RPL35P42766 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RPL35P42766 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.09□□□□□ -0.15
RPL35P42766 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
RPL35P42766 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
RPL35P42766 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RPL35P42766 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RPL35P42766 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.08□□□□□ -0.15
RPL35P42766 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
RPL35P42766 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
RPL35P42766 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
RPL35P42766 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
RPL35P42766 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.08□□□□□ -0.16
RPL35P42766 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.08□□□□□ -0.16
RPL35P42766 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RPL35P42766 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RPL35P42766 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RPL35P42766 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC14.08□□□□□ -0.16
RPL35P42766 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
RPL35P42766 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC14.08□□□□□ -0.16
RPL35P42766 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RPL35P42766 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RPL35P42766 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RPL35P42766 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
RPL35P42766 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.08□□□□□ -0.16
RPL35P42766 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.08□□□□□ -0.16
RPL35P42766 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RPL35P42766 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RPL35P42766 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
RPL35P42766 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RPL35P42766 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
RPL35P42766 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
RPL35P42766 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC14.08□□□□□ -0.16
RPL35P42766 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RPL35P42766 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RPL35P42766 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RPL35P42766 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RPL35P42766 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.08□□□□□ -0.16
RPL35P42766 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPL35P42766 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPL35P42766 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPL35P42766 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RPL35P42766 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPL35P42766 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
RPL35P42766 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
RPL35P42766 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPL35P42766 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RPL35P42766 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPL35P42766 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPL35P42766 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPL35P42766 AL359258.3-201ENST00000622910 2331 ntBASIC14.07□□□□□ -0.16
RPL35P42766 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPL35P42766 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RPL35P42766 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RPL35P42766 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPL35P42766 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
RPL35P42766 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPL35P42766 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPL35P42766 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPL35P42766 AC016769.1-201ENST00000409132 1010 ntBASIC14.07□□□□□ -0.16
RPL35P42766 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC14.07□□□□□ -0.16
RPL35P42766 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
RPL35P42766 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
RPL35P42766 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPL35P42766 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC14.07□□□□□ -0.16
RPL35P42766 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC14.07□□□□□ -0.16
RPL35P42766 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC14.07□□□□□ -0.16
RPL35P42766 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC14.07□□□□□ -0.16
RPL35P42766 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
RPL35P42766 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC14.07□□□□□ -0.16
RPL35P42766 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPL35P42766 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RPL35P42766 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPL35P42766 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC14.07□□□□□ -0.16
RPL35P42766 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.07□□□□□ -0.16
RPL35P42766 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RPL35P42766 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPL35P42766 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPL35P42766 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC14.07□□□□□ -0.16
RPL35P42766 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
RPL35P42766 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPL35P42766 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.07□□□□□ -0.16
RPL35P42766 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
RPL35P42766 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.07□□□□□ -0.16
RPL35P42766 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.07□□□□□ -0.16
RPL35P42766 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RPL35P42766 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPL35P42766 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RPL35P42766 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPL35P42766 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPL35P42766 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPL35P42766 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RPL35P42766 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.06□□□□□ -0.16
RPL35P42766 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
RPL35P42766 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPL35P42766 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms