Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
CEACAM3P40198 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CEACAM3P40198 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CEACAM3P40198 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.24□□□□□ -0.13
CEACAM3P40198 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CEACAM3P40198 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CEACAM3P40198 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CEACAM3P40198 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CEACAM3P40198 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CEACAM3P40198 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC14.23□□□□□ -0.13
CEACAM3P40198 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CEACAM3P40198 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CEACAM3P40198 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CEACAM3P40198 REXO1L11P-201ENST00000620964 1927 ntBASIC14.23□□□□□ -0.13
CEACAM3P40198 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CEACAM3P40198 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CEACAM3P40198 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CEACAM3P40198 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CEACAM3P40198 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CEACAM3P40198 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CEACAM3P40198 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CEACAM3P40198 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CEACAM3P40198 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CEACAM3P40198 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CEACAM3P40198 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.23□□□□□ -0.13
CEACAM3P40198 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.23□□□□□ -0.13
CEACAM3P40198 KLF4P1-201ENST00000412782 1185 ntBASIC14.23□□□□□ -0.13
CEACAM3P40198 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.23□□□□□ -0.13
CEACAM3P40198 RBM17P3-201ENST00000417687 1192 ntBASIC14.23□□□□□ -0.13
CEACAM3P40198 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.23□□□□□ -0.13
CEACAM3P40198 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.23□□□□□ -0.13
CEACAM3P40198 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.23□□□□□ -0.13
CEACAM3P40198 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.23□□□□□ -0.13
CEACAM3P40198 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CEACAM3P40198 AL691432.3-201ENST00000621860 400 ntBASIC14.23□□□□□ -0.13
CEACAM3P40198 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.23□□□□□ -0.13
CEACAM3P40198 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC14.23□□□□□ -0.13
CEACAM3P40198 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
CEACAM3P40198 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CEACAM3P40198 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CEACAM3P40198 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CEACAM3P40198 AL353593.2-201ENST00000602529 1483 ntBASIC14.23□□□□□ -0.13
CEACAM3P40198 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
CEACAM3P40198 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CEACAM3P40198 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CEACAM3P40198 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.23□□□□□ -0.13
CEACAM3P40198 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CEACAM3P40198 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CEACAM3P40198 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CEACAM3P40198 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC14.23□□□□□ -0.13
CEACAM3P40198 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CEACAM3P40198 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
CEACAM3P40198 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CEACAM3P40198 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.22□□□□□ -0.13
CEACAM3P40198 AC141586.5-201ENST00000624546 2050 ntBASIC14.22□□□□□ -0.13
CEACAM3P40198 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CEACAM3P40198 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CEACAM3P40198 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CEACAM3P40198 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CEACAM3P40198 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.22□□□□□ -0.13
CEACAM3P40198 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.22□□□□□ -0.13
CEACAM3P40198 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CEACAM3P40198 PCDHB18P-201ENST00000524813 2368 ntBASIC14.22□□□□□ -0.13
CEACAM3P40198 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CEACAM3P40198 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.22□□□□□ -0.13
CEACAM3P40198 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CEACAM3P40198 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CEACAM3P40198 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CEACAM3P40198 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.22□□□□□ -0.13
CEACAM3P40198 STK19B-204ENST00000512515 211 ntBASIC14.22□□□□□ -0.13
CEACAM3P40198 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.22□□□□□ -0.13
CEACAM3P40198 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.22□□□□□ -0.13
CEACAM3P40198 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CEACAM3P40198 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.22□□□□□ -0.13
CEACAM3P40198 AC019129.2-201ENST00000609837 1235 ntBASIC14.22□□□□□ -0.13
CEACAM3P40198 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.22□□□□□ -0.13
CEACAM3P40198 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.22□□□□□ -0.13
CEACAM3P40198 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CEACAM3P40198 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CEACAM3P40198 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CEACAM3P40198 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CEACAM3P40198 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CEACAM3P40198 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.22□□□□□ -0.13
CEACAM3P40198 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CEACAM3P40198 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CEACAM3P40198 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CEACAM3P40198 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC14.22□□□□□ -0.13
CEACAM3P40198 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CEACAM3P40198 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
CEACAM3P40198 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CEACAM3P40198 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CEACAM3P40198 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CEACAM3P40198 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.22□□□□□ -0.13
CEACAM3P40198 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CEACAM3P40198 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CEACAM3P40198 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CEACAM3P40198 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CEACAM3P40198 AL049757.1-201ENST00000616842 1596 ntBASIC14.22□□□□□ -0.13
CEACAM3P40198 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CEACAM3P40198 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms