Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CTNNA1P35221 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.41■□□□□ 0.54
CTNNA1P35221 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CTNNA1P35221 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CTNNA1P35221 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTNNA1P35221 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTNNA1P35221 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTNNA1P35221 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.41■□□□□ 0.54
CTNNA1P35221 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTNNA1P35221 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTNNA1P35221 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTNNA1P35221 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CTNNA1P35221 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CTNNA1P35221 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTNNA1P35221 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTNNA1P35221 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CTNNA1P35221 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
CTNNA1P35221 RNF152P1-201ENST00000397754 604 ntBASIC18.41■□□□□ 0.54
CTNNA1P35221 TSPY5P-201ENST00000426936 936 ntBASIC18.41■□□□□ 0.54
CTNNA1P35221 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.41■□□□□ 0.54
CTNNA1P35221 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.41■□□□□ 0.54
CTNNA1P35221 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CTNNA1P35221 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.41■□□□□ 0.54
CTNNA1P35221 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTNNA1P35221 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CTNNA1P35221 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CTNNA1P35221 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.41■□□□□ 0.54
CTNNA1P35221 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.41■□□□□ 0.54
CTNNA1P35221 AC073912.3-201ENST00000624414 853 ntBASIC18.41■□□□□ 0.54
CTNNA1P35221 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.41■□□□□ 0.54
CTNNA1P35221 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CTNNA1P35221 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTNNA1P35221 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CTNNA1P35221 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CTNNA1P35221 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTNNA1P35221 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CTNNA1P35221 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.41■□□□□ 0.54
CTNNA1P35221 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.41■□□□□ 0.54
CTNNA1P35221 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CTNNA1P35221 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTNNA1P35221 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CTNNA1P35221 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTNNA1P35221 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTNNA1P35221 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTNNA1P35221 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTNNA1P35221 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTNNA1P35221 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.4■□□□□ 0.54
CTNNA1P35221 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTNNA1P35221 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTNNA1P35221 AC060834.1-201ENST00000443027 2032 ntBASIC18.4■□□□□ 0.54
CTNNA1P35221 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTNNA1P35221 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTNNA1P35221 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTNNA1P35221 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.4■□□□□ 0.54
CTNNA1P35221 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTNNA1P35221 PCDH8P1-201ENST00000428983 2773 ntBASIC18.4■□□□□ 0.54
CTNNA1P35221 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTNNA1P35221 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CTNNA1P35221 AC010460.3-201ENST00000511359 1579 ntBASIC18.4■□□□□ 0.54
CTNNA1P35221 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.4■□□□□ 0.54
CTNNA1P35221 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTNNA1P35221 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CTNNA1P35221 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTNNA1P35221 AC005521.1-201ENST00000393351 872 ntBASIC18.4■□□□□ 0.54
CTNNA1P35221 AC112907.2-201ENST00000448639 330 ntBASIC18.4■□□□□ 0.54
CTNNA1P35221 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.4■□□□□ 0.54
CTNNA1P35221 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.4■□□□□ 0.54
CTNNA1P35221 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTNNA1P35221 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTNNA1P35221 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTNNA1P35221 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.4■□□□□ 0.54
CTNNA1P35221 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTNNA1P35221 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.4■□□□□ 0.54
CTNNA1P35221 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.4■□□□□ 0.54
CTNNA1P35221 PCDHA14-201ENST00000506751 2298 ntBASIC18.4■□□□□ 0.54
CTNNA1P35221 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CTNNA1P35221 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.4■□□□□ 0.54
CTNNA1P35221 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CTNNA1P35221 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
CTNNA1P35221 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CTNNA1P35221 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTNNA1P35221 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.4■□□□□ 0.54
CTNNA1P35221 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTNNA1P35221 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.4■□□□□ 0.54
CTNNA1P35221 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTNNA1P35221 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
CTNNA1P35221 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTNNA1P35221 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CTNNA1P35221 AC105020.1-201ENST00000435356 2205 ntBASIC18.39■□□□□ 0.54
CTNNA1P35221 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
CTNNA1P35221 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.39■□□□□ 0.54
CTNNA1P35221 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTNNA1P35221 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTNNA1P35221 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CTNNA1P35221 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTNNA1P35221 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTNNA1P35221 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTNNA1P35221 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTNNA1P35221 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTNNA1P35221 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms