Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.83■□□□□ 0.6
HOXC8P31273 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXC8P31273 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
HOXC8P31273 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXC8P31273 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXC8P31273 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC8P31273 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC8P31273 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC8P31273 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC8P31273 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
HOXC8P31273 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC8P31273 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC8P31273 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC8P31273 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC8P31273 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC8P31273 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.82■□□□□ 0.6
HOXC8P31273 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
HOXC8P31273 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC8P31273 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.82■□□□□ 0.6
HOXC8P31273 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.82■□□□□ 0.6
HOXC8P31273 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.82■□□□□ 0.6
HOXC8P31273 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.82■□□□□ 0.6
HOXC8P31273 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
HOXC8P31273 TIMM8BP1-201ENST00000452384 211 ntBASIC18.82■□□□□ 0.6
HOXC8P31273 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.82■□□□□ 0.6
HOXC8P31273 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.82■□□□□ 0.6
HOXC8P31273 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.82■□□□□ 0.6
HOXC8P31273 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.82■□□□□ 0.6
HOXC8P31273 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.82■□□□□ 0.6
HOXC8P31273 LINC00628-201ENST00000628516 1289 ntBASIC18.82■□□□□ 0.6
HOXC8P31273 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.82■□□□□ 0.6
HOXC8P31273 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.82■□□□□ 0.6
HOXC8P31273 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC8P31273 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC8P31273 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC8P31273 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC8P31273 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.82■□□□□ 0.6
HOXC8P31273 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC8P31273 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.82■□□□□ 0.6
HOXC8P31273 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC8P31273 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC8P31273 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC8P31273 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC8P31273 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC8P31273 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXC8P31273 AKAP8P1-201ENST00000434743 1349 ntBASIC18.81■□□□□ 0.6
HOXC8P31273 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
HOXC8P31273 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
HOXC8P31273 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC8P31273 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC8P31273 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC8P31273 SLC25A1P3-201ENST00000395415 828 ntBASIC18.81■□□□□ 0.6
HOXC8P31273 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.81■□□□□ 0.6
HOXC8P31273 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.81■□□□□ 0.6
HOXC8P31273 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXC8P31273 RN7SL589P-201ENST00000481268 310 ntBASIC18.81■□□□□ 0.6
HOXC8P31273 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXC8P31273 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
HOXC8P31273 AC025678.2-201ENST00000562061 970 ntBASIC18.81■□□□□ 0.6
HOXC8P31273 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.81■□□□□ 0.6
HOXC8P31273 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXC8P31273 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.81■□□□□ 0.6
HOXC8P31273 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXC8P31273 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXC8P31273 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HOXC8P31273 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC8P31273 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC8P31273 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC8P31273 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC8P31273 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HOXC8P31273 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.81■□□□□ 0.6
HOXC8P31273 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
HOXC8P31273 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC8P31273 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.8■□□□□ 0.6
HOXC8P31273 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.8■□□□□ 0.6
HOXC8P31273 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC8P31273 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.8■□□□□ 0.6
HOXC8P31273 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC8P31273 FAM8A3P-201ENST00000427218 844 ntBASIC18.8■□□□□ 0.6
HOXC8P31273 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC8P31273 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.8■□□□□ 0.6
HOXC8P31273 AC079140.1-201ENST00000508039 487 ntBASIC18.8■□□□□ 0.6
HOXC8P31273 AC109635.5-201ENST00000533593 962 ntBASIC18.8■□□□□ 0.6
HOXC8P31273 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.8■□□□□ 0.6
HOXC8P31273 AC004449.1-201ENST00000564240 433 ntBASIC18.8■□□□□ 0.6
HOXC8P31273 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC8P31273 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.8■□□□□ 0.6
HOXC8P31273 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC8P31273 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC8P31273 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
HOXC8P31273 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC8P31273 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
HOXC8P31273 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.8■□□□□ 0.6
HOXC8P31273 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC8P31273 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.8■□□□□ 0.6
HOXC8P31273 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC8P31273 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.8■□□□□ 0.6
HOXC8P31273 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC8P31273 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC8P31273 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms