Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 AC134684.3-201ENST00000641758 218 ntBASIC18.72■□□□□ 0.59
HOXA11P31270 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
HOXA11P31270 AC025580.3-201ENST00000617932 1424 ntBASIC18.72■□□□□ 0.59
HOXA11P31270 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.72■□□□□ 0.59
HOXA11P31270 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
HOXA11P31270 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.72■□□□□ 0.59
HOXA11P31270 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
HOXA11P31270 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
HOXA11P31270 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
HOXA11P31270 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.71■□□□□ 0.59
HOXA11P31270 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
HOXA11P31270 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HOXA11P31270 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.71■□□□□ 0.59
HOXA11P31270 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.71■□□□□ 0.59
HOXA11P31270 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HOXA11P31270 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
HOXA11P31270 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.71■□□□□ 0.59
HOXA11P31270 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
HOXA11P31270 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HOXA11P31270 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
HOXA11P31270 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.71■□□□□ 0.59
HOXA11P31270 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.71■□□□□ 0.59
HOXA11P31270 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HOXA11P31270 ALG1L5P-201ENST00000482043 771 ntBASIC18.71■□□□□ 0.59
HOXA11P31270 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.71■□□□□ 0.59
HOXA11P31270 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.71■□□□□ 0.59
HOXA11P31270 AC005829.1-201ENST00000570002 483 ntBASIC18.71■□□□□ 0.59
HOXA11P31270 ACTL9-202ENST00000612068 1252 ntBASIC18.71■□□□□ 0.59
HOXA11P31270 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HOXA11P31270 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
HOXA11P31270 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HOXA11P31270 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HOXA11P31270 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
HOXA11P31270 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HOXA11P31270 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HOXA11P31270 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HOXA11P31270 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.7■□□□□ 0.58
HOXA11P31270 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HOXA11P31270 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.7■□□□□ 0.58
HOXA11P31270 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.7■□□□□ 0.58
HOXA11P31270 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.7■□□□□ 0.58
HOXA11P31270 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.7■□□□□ 0.58
HOXA11P31270 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.7■□□□□ 0.58
HOXA11P31270 AP001160.2-201ENST00000596071 487 ntBASIC18.7■□□□□ 0.58
HOXA11P31270 C20orf181-201ENST00000623918 480 ntBASIC18.7■□□□□ 0.58
HOXA11P31270 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.7■□□□□ 0.58
HOXA11P31270 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
HOXA11P31270 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HOXA11P31270 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HOXA11P31270 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.7■□□□□ 0.58
HOXA11P31270 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
HOXA11P31270 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
HOXA11P31270 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HOXA11P31270 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
HOXA11P31270 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXA11P31270 SLC25A1P3-201ENST00000395415 828 ntBASIC18.69■□□□□ 0.58
HOXA11P31270 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
HOXA11P31270 AC004967.1-201ENST00000453589 447 ntBASIC18.69■□□□□ 0.58
HOXA11P31270 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXA11P31270 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.69■□□□□ 0.58
HOXA11P31270 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.69■□□□□ 0.58
HOXA11P31270 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.69■□□□□ 0.58
HOXA11P31270 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXA11P31270 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.69■□□□□ 0.58
HOXA11P31270 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXA11P31270 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXA11P31270 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXA11P31270 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HOXA11P31270 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.69■□□□□ 0.58
HOXA11P31270 NOC2LP2-201ENST00000407594 1944 ntBASIC18.68■□□□□ 0.58
HOXA11P31270 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
HOXA11P31270 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
HOXA11P31270 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.68■□□□□ 0.58
HOXA11P31270 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXA11P31270 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
HOXA11P31270 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
HOXA11P31270 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HOXA11P31270 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXA11P31270 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXA11P31270 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.68■□□□□ 0.58
HOXA11P31270 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.68■□□□□ 0.58
HOXA11P31270 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.68■□□□□ 0.58
HOXA11P31270 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.68■□□□□ 0.58
HOXA11P31270 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
HOXA11P31270 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.68■□□□□ 0.58
HOXA11P31270 AC023141.13-201ENST00000604991 943 ntBASIC18.68■□□□□ 0.58
HOXA11P31270 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.68■□□□□ 0.58
HOXA11P31270 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXA11P31270 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.68■□□□□ 0.58
HOXA11P31270 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.68■□□□□ 0.58
HOXA11P31270 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HOXA11P31270 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXA11P31270 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXA11P31270 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.68■□□□□ 0.58
HOXA11P31270 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
HOXA11P31270 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.68■□□□□ 0.58
HOXA11P31270 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXA11P31270 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXA11P31270 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HOXA11P31270 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms