Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MMP8P22894 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MMP8P22894 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MMP8P22894 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MMP8P22894 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
MMP8P22894 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
MMP8P22894 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.3■□□□□ 0.52
MMP8P22894 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.3■□□□□ 0.52
MMP8P22894 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MMP8P22894 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.3■□□□□ 0.52
MMP8P22894 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.3■□□□□ 0.52
MMP8P22894 AP001269.4-201ENST00000609611 512 ntBASIC18.3■□□□□ 0.52
MMP8P22894 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MMP8P22894 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.3■□□□□ 0.52
MMP8P22894 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
MMP8P22894 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
MMP8P22894 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MMP8P22894 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
MMP8P22894 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MMP8P22894 AP005117.1-201ENST00000584346 1413 ntBASIC18.3■□□□□ 0.52
MMP8P22894 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
MMP8P22894 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MMP8P22894 AC079776.2-201ENST00000641154 1609 ntBASIC18.3■□□□□ 0.52
MMP8P22894 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MMP8P22894 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.3■□□□□ 0.52
MMP8P22894 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MMP8P22894 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
MMP8P22894 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MMP8P22894 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MMP8P22894 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.29■□□□□ 0.52
MMP8P22894 AD000864.1-201ENST00000624076 2295 ntBASIC18.29■□□□□ 0.52
MMP8P22894 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MMP8P22894 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MMP8P22894 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
MMP8P22894 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.29■□□□□ 0.52
MMP8P22894 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.29■□□□□ 0.52
MMP8P22894 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
MMP8P22894 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.29■□□□□ 0.52
MMP8P22894 SIGLEC30P-201ENST00000455569 941 ntBASIC18.29■□□□□ 0.52
MMP8P22894 AC106795.1-205ENST00000512851 1056 ntBASIC18.29■□□□□ 0.52
MMP8P22894 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
MMP8P22894 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.29■□□□□ 0.52
MMP8P22894 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.29■□□□□ 0.52
MMP8P22894 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.29■□□□□ 0.52
MMP8P22894 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.29■□□□□ 0.52
MMP8P22894 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
MMP8P22894 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MMP8P22894 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
MMP8P22894 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MMP8P22894 EGFEM1P-202ENST00000431685 1563 ntBASIC18.29■□□□□ 0.52
MMP8P22894 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
MMP8P22894 AC092053.1-201ENST00000605787 1936 ntBASIC18.29■□□□□ 0.52
MMP8P22894 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.29■□□□□ 0.52
MMP8P22894 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
MMP8P22894 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.29■□□□□ 0.52
MMP8P22894 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
MMP8P22894 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
MMP8P22894 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.28■□□□□ 0.52
MMP8P22894 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MMP8P22894 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.28■□□□□ 0.52
MMP8P22894 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MMP8P22894 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.28■□□□□ 0.52
MMP8P22894 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MMP8P22894 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.28■□□□□ 0.52
MMP8P22894 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MMP8P22894 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MMP8P22894 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MMP8P22894 TSPY19P-201ENST00000418461 509 ntBASIC18.28■□□□□ 0.52
MMP8P22894 TSPY18P-201ENST00000441642 509 ntBASIC18.28■□□□□ 0.52
MMP8P22894 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.28■□□□□ 0.52
MMP8P22894 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MMP8P22894 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.28■□□□□ 0.52
MMP8P22894 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.28■□□□□ 0.52
MMP8P22894 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.28■□□□□ 0.52
MMP8P22894 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MMP8P22894 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.28■□□□□ 0.52
MMP8P22894 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.28■□□□□ 0.52
MMP8P22894 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.28■□□□□ 0.52
MMP8P22894 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
MMP8P22894 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.28■□□□□ 0.52
MMP8P22894 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
MMP8P22894 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MMP8P22894 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
MMP8P22894 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MMP8P22894 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
MMP8P22894 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.28■□□□□ 0.52
MMP8P22894 HCG11-201ENST00000411553 5696 ntBASIC18.27■□□□□ 0.52
MMP8P22894 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MMP8P22894 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.27■□□□□ 0.52
MMP8P22894 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
MMP8P22894 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
MMP8P22894 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MMP8P22894 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.27■□□□□ 0.52
MMP8P22894 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.27■□□□□ 0.52
MMP8P22894 KRT18P31-201ENST00000506277 1292 ntBASIC18.27■□□□□ 0.52
MMP8P22894 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MMP8P22894 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.27■□□□□ 0.52
MMP8P22894 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.27■□□□□ 0.52
MMP8P22894 AL121772.3-201ENST00000610840 674 ntBASIC18.27■□□□□ 0.52
MMP8P22894 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms