Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.94■□□□□ 0.46
BRAFP15056 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
BRAFP15056 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BRAFP15056 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.94■□□□□ 0.46
BRAFP15056 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.94■□□□□ 0.46
BRAFP15056 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BRAFP15056 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.94■□□□□ 0.46
BRAFP15056 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.94■□□□□ 0.46
BRAFP15056 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
BRAFP15056 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.94■□□□□ 0.46
BRAFP15056 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BRAFP15056 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BRAFP15056 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.94■□□□□ 0.46
BRAFP15056 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
BRAFP15056 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.94■□□□□ 0.46
BRAFP15056 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
BRAFP15056 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BRAFP15056 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BRAFP15056 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BRAFP15056 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.93■□□□□ 0.46
BRAFP15056 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
BRAFP15056 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
BRAFP15056 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.93■□□□□ 0.46
BRAFP15056 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.93■□□□□ 0.46
BRAFP15056 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
BRAFP15056 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.93■□□□□ 0.46
BRAFP15056 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
BRAFP15056 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BRAFP15056 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.93■□□□□ 0.46
BRAFP15056 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BRAFP15056 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BRAFP15056 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.93■□□□□ 0.46
BRAFP15056 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.93■□□□□ 0.46
BRAFP15056 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.93■□□□□ 0.46
BRAFP15056 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.93■□□□□ 0.46
BRAFP15056 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
BRAFP15056 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.93■□□□□ 0.46
BRAFP15056 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.93■□□□□ 0.46
BRAFP15056 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
BRAFP15056 RNF126P1-202ENST00000569893 925 ntBASIC17.93■□□□□ 0.46
BRAFP15056 AC011498.5-201ENST00000592027 486 ntBASIC17.93■□□□□ 0.46
BRAFP15056 LINC01451-201ENST00000623792 534 ntBASIC17.93■□□□□ 0.46
BRAFP15056 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.93■□□□□ 0.46
BRAFP15056 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
BRAFP15056 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
BRAFP15056 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BRAFP15056 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BRAFP15056 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.93■□□□□ 0.46
BRAFP15056 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
BRAFP15056 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BRAFP15056 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.92■□□□□ 0.46
BRAFP15056 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
BRAFP15056 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRAFP15056 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
BRAFP15056 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
BRAFP15056 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
BRAFP15056 REXO1L11P-201ENST00000620964 1927 ntBASIC17.92■□□□□ 0.46
BRAFP15056 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
BRAFP15056 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
BRAFP15056 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRAFP15056 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRAFP15056 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.92■□□□□ 0.46
BRAFP15056 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRAFP15056 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRAFP15056 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRAFP15056 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
BRAFP15056 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRAFP15056 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
BRAFP15056 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRAFP15056 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRAFP15056 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRAFP15056 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
BRAFP15056 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
BRAFP15056 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
BRAFP15056 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.92■□□□□ 0.46
BRAFP15056 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.92■□□□□ 0.46
BRAFP15056 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.92■□□□□ 0.46
BRAFP15056 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRAFP15056 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRAFP15056 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
BRAFP15056 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRAFP15056 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
BRAFP15056 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
BRAFP15056 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRAFP15056 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRAFP15056 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRAFP15056 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
BRAFP15056 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
BRAFP15056 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
BRAFP15056 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
BRAFP15056 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
BRAFP15056 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.92■□□□□ 0.46
BRAFP15056 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BRAFP15056 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
BRAFP15056 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BRAFP15056 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BRAFP15056 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
BRAFP15056 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.91■□□□□ 0.46
BRAFP15056 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
BRAFP15056 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms