Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
FAM228BP0C875 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FAM228BP0C875 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
FAM228BP0C875 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
FAM228BP0C875 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
FAM228BP0C875 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FAM228BP0C875 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
FAM228BP0C875 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
FAM228BP0C875 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
FAM228BP0C875 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
FAM228BP0C875 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
FAM228BP0C875 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.57■□□□□ 0.56
FAM228BP0C875 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.57■□□□□ 0.56
FAM228BP0C875 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.57■□□□□ 0.56
FAM228BP0C875 RCN1P1-201ENST00000400413 996 ntBASIC18.57■□□□□ 0.56
FAM228BP0C875 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.57■□□□□ 0.56
FAM228BP0C875 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.57■□□□□ 0.56
FAM228BP0C875 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.57■□□□□ 0.56
FAM228BP0C875 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.57■□□□□ 0.56
FAM228BP0C875 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
FAM228BP0C875 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
FAM228BP0C875 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
FAM228BP0C875 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.57■□□□□ 0.56
FAM228BP0C875 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FAM228BP0C875 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.57■□□□□ 0.56
FAM228BP0C875 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FAM228BP0C875 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
FAM228BP0C875 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
FAM228BP0C875 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
FAM228BP0C875 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FAM228BP0C875 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
FAM228BP0C875 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
FAM228BP0C875 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
FAM228BP0C875 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
FAM228BP0C875 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
FAM228BP0C875 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.56■□□□□ 0.56
FAM228BP0C875 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
FAM228BP0C875 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
FAM228BP0C875 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
FAM228BP0C875 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FAM228BP0C875 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
FAM228BP0C875 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FAM228BP0C875 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
FAM228BP0C875 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FAM228BP0C875 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
FAM228BP0C875 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
FAM228BP0C875 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FAM228BP0C875 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FAM228BP0C875 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
FAM228BP0C875 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
FAM228BP0C875 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
FAM228BP0C875 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.56■□□□□ 0.56
FAM228BP0C875 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.56■□□□□ 0.56
FAM228BP0C875 AC090616.6-201ENST00000582640 721 ntBASIC18.56■□□□□ 0.56
FAM228BP0C875 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FAM228BP0C875 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
FAM228BP0C875 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
FAM228BP0C875 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.56■□□□□ 0.56
FAM228BP0C875 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.56■□□□□ 0.56
FAM228BP0C875 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.56■□□□□ 0.56
FAM228BP0C875 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
FAM228BP0C875 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.56■□□□□ 0.56
FAM228BP0C875 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FAM228BP0C875 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FAM228BP0C875 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
FAM228BP0C875 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
FAM228BP0C875 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
FAM228BP0C875 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
FAM228BP0C875 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FAM228BP0C875 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
FAM228BP0C875 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.55■□□□□ 0.56
FAM228BP0C875 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.55■□□□□ 0.56
FAM228BP0C875 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
FAM228BP0C875 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
FAM228BP0C875 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
FAM228BP0C875 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.55■□□□□ 0.56
FAM228BP0C875 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.55■□□□□ 0.56
FAM228BP0C875 AC103564.2-201ENST00000432853 1299 ntBASIC18.55■□□□□ 0.56
FAM228BP0C875 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.55■□□□□ 0.56
FAM228BP0C875 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.55■□□□□ 0.56
FAM228BP0C875 STK25P1-201ENST00000585406 838 ntBASIC18.55■□□□□ 0.56
FAM228BP0C875 IGHV3-41-201ENST00000613121 348 ntBASIC18.55■□□□□ 0.56
FAM228BP0C875 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.55■□□□□ 0.56
FAM228BP0C875 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FAM228BP0C875 AC078925.2-201ENST00000624013 1973 ntBASIC18.55■□□□□ 0.56
FAM228BP0C875 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FAM228BP0C875 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
FAM228BP0C875 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.55■□□□□ 0.56
FAM228BP0C875 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.55■□□□□ 0.56
FAM228BP0C875 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.55■□□□□ 0.56
FAM228BP0C875 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FAM228BP0C875 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
FAM228BP0C875 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
FAM228BP0C875 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FAM228BP0C875 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FAM228BP0C875 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.54■□□□□ 0.56
FAM228BP0C875 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.54■□□□□ 0.56
FAM228BP0C875 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
FAM228BP0C875 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
FAM228BP0C875 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms