Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
FREM3P0C091 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
FREM3P0C091 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC15.81■□□□□ 0.12
FREM3P0C091 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FREM3P0C091 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FREM3P0C091 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.81■□□□□ 0.12
FREM3P0C091 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.81■□□□□ 0.12
FREM3P0C091 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
FREM3P0C091 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
FREM3P0C091 AC009336.1-201ENST00000608941 1553 ntBASIC15.81■□□□□ 0.12
FREM3P0C091 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.81■□□□□ 0.12
FREM3P0C091 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
FREM3P0C091 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
FREM3P0C091 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.8■□□□□ 0.12
FREM3P0C091 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.8■□□□□ 0.12
FREM3P0C091 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
FREM3P0C091 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.8■□□□□ 0.12
FREM3P0C091 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.8■□□□□ 0.12
FREM3P0C091 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.8■□□□□ 0.12
FREM3P0C091 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.8■□□□□ 0.12
FREM3P0C091 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.8■□□□□ 0.12
FREM3P0C091 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.8■□□□□ 0.12
FREM3P0C091 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.8■□□□□ 0.12
FREM3P0C091 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.8■□□□□ 0.12
FREM3P0C091 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.8■□□□□ 0.12
FREM3P0C091 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.8■□□□□ 0.12
FREM3P0C091 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.8■□□□□ 0.12
FREM3P0C091 AC107918.4-202ENST00000641623 219 ntBASIC15.8■□□□□ 0.12
FREM3P0C091 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.8■□□□□ 0.12
FREM3P0C091 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FREM3P0C091 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
FREM3P0C091 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FREM3P0C091 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FREM3P0C091 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FREM3P0C091 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
FREM3P0C091 AC141586.5-201ENST00000624546 2050 ntBASIC15.8■□□□□ 0.12
FREM3P0C091 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FREM3P0C091 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.8■□□□□ 0.12
FREM3P0C091 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
FREM3P0C091 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FREM3P0C091 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
FREM3P0C091 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FREM3P0C091 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
FREM3P0C091 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
FREM3P0C091 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
FREM3P0C091 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FREM3P0C091 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FREM3P0C091 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
FREM3P0C091 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
FREM3P0C091 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FREM3P0C091 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.8■□□□□ 0.12
FREM3P0C091 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
FREM3P0C091 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
FREM3P0C091 AC073621.1-201ENST00000392730 636 ntBASIC15.8■□□□□ 0.12
FREM3P0C091 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.8■□□□□ 0.12
FREM3P0C091 PRYP5-201ENST00000451909 266 ntBASIC15.8■□□□□ 0.12
FREM3P0C091 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.8■□□□□ 0.12
FREM3P0C091 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.8■□□□□ 0.12
FREM3P0C091 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.8■□□□□ 0.12
FREM3P0C091 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.8■□□□□ 0.12
FREM3P0C091 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
FREM3P0C091 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.8■□□□□ 0.12
FREM3P0C091 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FREM3P0C091 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.8■□□□□ 0.12
FREM3P0C091 LYSMD4-203ENST00000378904 2122 ntBASIC15.8■□□□□ 0.12
FREM3P0C091 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.8■□□□□ 0.12
FREM3P0C091 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
FREM3P0C091 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FREM3P0C091 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FREM3P0C091 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FREM3P0C091 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
FREM3P0C091 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
FREM3P0C091 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.79■□□□□ 0.12
FREM3P0C091 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FREM3P0C091 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
FREM3P0C091 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
FREM3P0C091 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FREM3P0C091 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.79■□□□□ 0.12
FREM3P0C091 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FREM3P0C091 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FREM3P0C091 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
FREM3P0C091 AC080080.1-201ENST00000625121 2420 ntBASIC15.79■□□□□ 0.12
FREM3P0C091 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.79■□□□□ 0.12
FREM3P0C091 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.79■□□□□ 0.12
FREM3P0C091 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FREM3P0C091 AC092910.1-201ENST00000482027 1129 ntBASIC15.79■□□□□ 0.12
FREM3P0C091 RNPS1P1-201ENST00000507437 918 ntBASIC15.79■□□□□ 0.12
FREM3P0C091 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FREM3P0C091 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.79■□□□□ 0.12
FREM3P0C091 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
FREM3P0C091 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.79■□□□□ 0.12
FREM3P0C091 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.79■□□□□ 0.12
FREM3P0C091 AC140113.2-201ENST00000604370 208 ntBASIC15.79■□□□□ 0.12
FREM3P0C091 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
FREM3P0C091 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
FREM3P0C091 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.79■□□□□ 0.12
FREM3P0C091 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
FREM3P0C091 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FREM3P0C091 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
FREM3P0C091 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms