Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD48P09326 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CD48P09326 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CD48P09326 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD48P09326 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CD48P09326 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CD48P09326 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.05■□□□□ 0.48
CD48P09326 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD48P09326 AC009336.1-201ENST00000608941 1553 ntBASIC18.04■□□□□ 0.48
CD48P09326 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.04■□□□□ 0.48
CD48P09326 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.04■□□□□ 0.48
CD48P09326 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD48P09326 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD48P09326 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD48P09326 NKILA-202ENST00000614771 2598 ntBASIC18.04■□□□□ 0.48
CD48P09326 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD48P09326 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CD48P09326 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CD48P09326 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD48P09326 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD48P09326 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD48P09326 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD48P09326 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD48P09326 AC011676.5-201ENST00000624864 2660 ntBASIC18.04■□□□□ 0.48
CD48P09326 AL135999.2-201ENST00000622438 1686 ntBASIC18.04■□□□□ 0.48
CD48P09326 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD48P09326 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD48P09326 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.04■□□□□ 0.48
CD48P09326 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.04■□□□□ 0.48
CD48P09326 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CD48P09326 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.04■□□□□ 0.48
CD48P09326 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CD48P09326 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.04■□□□□ 0.48
CD48P09326 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.04■□□□□ 0.48
CD48P09326 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.04■□□□□ 0.48
CD48P09326 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.04■□□□□ 0.48
CD48P09326 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.04■□□□□ 0.48
CD48P09326 AC073592.5-201ENST00000624854 528 ntBASIC18.04■□□□□ 0.48
CD48P09326 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.04■□□□□ 0.48
CD48P09326 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CD48P09326 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CD48P09326 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD48P09326 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD48P09326 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD48P09326 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD48P09326 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CD48P09326 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.04■□□□□ 0.48
CD48P09326 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.04■□□□□ 0.48
CD48P09326 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD48P09326 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
CD48P09326 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CD48P09326 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
CD48P09326 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CD48P09326 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.04■□□□□ 0.48
CD48P09326 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CD48P09326 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CD48P09326 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CD48P09326 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CD48P09326 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CD48P09326 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CD48P09326 AC148477.5-201ENST00000625164 1645 ntBASIC18.03■□□□□ 0.48
CD48P09326 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.03■□□□□ 0.48
CD48P09326 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CD48P09326 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.03■□□□□ 0.48
CD48P09326 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CD48P09326 UPK3BP1-201ENST00000428678 509 ntBASIC18.03■□□□□ 0.48
CD48P09326 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.03■□□□□ 0.48
CD48P09326 STK19B-204ENST00000512515 211 ntBASIC18.03■□□□□ 0.48
CD48P09326 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CD48P09326 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.03■□□□□ 0.48
CD48P09326 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.03■□□□□ 0.48
CD48P09326 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.03■□□□□ 0.48
CD48P09326 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.03■□□□□ 0.48
CD48P09326 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CD48P09326 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.03■□□□□ 0.48
CD48P09326 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.03■□□□□ 0.48
CD48P09326 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.03■□□□□ 0.48
CD48P09326 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CD48P09326 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.03■□□□□ 0.48
CD48P09326 PMPCAP1-201ENST00000508114 1576 ntBASIC18.03■□□□□ 0.48
CD48P09326 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CD48P09326 LINC02012-201ENST00000608206 1725 ntBASIC18.03■□□□□ 0.48
CD48P09326 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CD48P09326 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CD48P09326 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.03■□□□□ 0.48
CD48P09326 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.03■□□□□ 0.48
CD48P09326 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CD48P09326 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CD48P09326 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.02■□□□□ 0.48
CD48P09326 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.02■□□□□ 0.48
CD48P09326 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CD48P09326 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CD48P09326 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CD48P09326 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CD48P09326 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CD48P09326 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CD48P09326 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CD48P09326 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CD48P09326 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
CD48P09326 NUS1P2-201ENST00000417358 873 ntBASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms