Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP2P08253 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP2P08253 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.49■□□□□ 0.39
MMP2P08253 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP2P08253 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.49■□□□□ 0.39
MMP2P08253 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.49■□□□□ 0.39
MMP2P08253 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.49■□□□□ 0.39
MMP2P08253 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
MMP2P08253 MTDHP4-201ENST00000600287 670 ntBASIC17.49■□□□□ 0.39
MMP2P08253 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.49■□□□□ 0.39
MMP2P08253 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP2P08253 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP2P08253 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
MMP2P08253 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP2P08253 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP2P08253 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP2P08253 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MMP2P08253 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MMP2P08253 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MMP2P08253 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP2P08253 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MMP2P08253 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP2P08253 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MMP2P08253 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MMP2P08253 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP2P08253 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.49■□□□□ 0.39
MMP2P08253 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP2P08253 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
MMP2P08253 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.49■□□□□ 0.39
MMP2P08253 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MMP2P08253 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
MMP2P08253 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP2P08253 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.48■□□□□ 0.39
MMP2P08253 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP2P08253 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MMP2P08253 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP2P08253 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MMP2P08253 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
MMP2P08253 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP2P08253 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.48■□□□□ 0.39
MMP2P08253 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MMP2P08253 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
MMP2P08253 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.48■□□□□ 0.39
MMP2P08253 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP2P08253 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
MMP2P08253 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP2P08253 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.48■□□□□ 0.39
MMP2P08253 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
MMP2P08253 SCARNA2-201ENST00000458748 420 ntBASIC17.48■□□□□ 0.39
MMP2P08253 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.48■□□□□ 0.39
MMP2P08253 AL121912.1-201ENST00000603683 238 ntBASIC17.48■□□□□ 0.39
MMP2P08253 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
MMP2P08253 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP2P08253 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MMP2P08253 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
MMP2P08253 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
MMP2P08253 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.48■□□□□ 0.39
MMP2P08253 AC092053.1-201ENST00000605787 1936 ntBASIC17.48■□□□□ 0.39
MMP2P08253 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.48■□□□□ 0.39
MMP2P08253 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP2P08253 EGFEM1P-202ENST00000431685 1563 ntBASIC17.48■□□□□ 0.39
MMP2P08253 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.48■□□□□ 0.39
MMP2P08253 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP2P08253 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MMP2P08253 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP2P08253 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.48■□□□□ 0.39
MMP2P08253 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP2P08253 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MMP2P08253 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
MMP2P08253 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MMP2P08253 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
MMP2P08253 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MMP2P08253 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MMP2P08253 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MMP2P08253 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.47■□□□□ 0.39
MMP2P08253 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MMP2P08253 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MMP2P08253 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
MMP2P08253 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.47■□□□□ 0.39
MMP2P08253 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MMP2P08253 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.47■□□□□ 0.39
MMP2P08253 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
MMP2P08253 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.47■□□□□ 0.39
MMP2P08253 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
MMP2P08253 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
MMP2P08253 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
MMP2P08253 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
MMP2P08253 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
MMP2P08253 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MMP2P08253 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MMP2P08253 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MMP2P08253 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
MMP2P08253 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MMP2P08253 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MMP2P08253 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.47■□□□□ 0.39
MMP2P08253 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.47■□□□□ 0.39
MMP2P08253 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.47■□□□□ 0.39
MMP2P08253 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
MMP2P08253 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MMP2P08253 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms