Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ERCC1P07992 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
ERCC1P07992 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.48■□□□□ 0.07
ERCC1P07992 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
ERCC1P07992 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
ERCC1P07992 HLA-J-201ENST00000462773 1622 ntBASIC15.48■□□□□ 0.07
ERCC1P07992 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ERCC1P07992 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ERCC1P07992 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ERCC1P07992 AP002383.4-201ENST00000442518 975 ntBASIC15.48■□□□□ 0.07
ERCC1P07992 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
ERCC1P07992 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
ERCC1P07992 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.48■□□□□ 0.07
ERCC1P07992 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.48■□□□□ 0.07
ERCC1P07992 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.48■□□□□ 0.07
ERCC1P07992 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.48■□□□□ 0.07
ERCC1P07992 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.48■□□□□ 0.07
ERCC1P07992 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.48■□□□□ 0.07
ERCC1P07992 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ERCC1P07992 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.48■□□□□ 0.07
ERCC1P07992 AC124864.1-201ENST00000623408 392 ntBASIC15.48■□□□□ 0.07
ERCC1P07992 LINC01451-201ENST00000623792 534 ntBASIC15.48■□□□□ 0.07
ERCC1P07992 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.48■□□□□ 0.07
ERCC1P07992 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
ERCC1P07992 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ERCC1P07992 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.48■□□□□ 0.07
ERCC1P07992 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
ERCC1P07992 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
ERCC1P07992 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
ERCC1P07992 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.48■□□□□ 0.07
ERCC1P07992 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ERCC1P07992 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ERCC1P07992 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.47■□□□□ 0.07
ERCC1P07992 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.47■□□□□ 0.07
ERCC1P07992 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC1P07992 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC1P07992 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC1P07992 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC1P07992 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC1P07992 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
ERCC1P07992 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.47■□□□□ 0.07
ERCC1P07992 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC1P07992 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC1P07992 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC1P07992 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC1P07992 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC1P07992 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC1P07992 AC004870.1-201ENST00000315132 882 ntBASIC15.47■□□□□ 0.07
ERCC1P07992 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC1P07992 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC1P07992 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC1P07992 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
ERCC1P07992 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC1P07992 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.47■□□□□ 0.07
ERCC1P07992 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC1P07992 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC1P07992 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC1P07992 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC1P07992 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.47■□□□□ 0.07
ERCC1P07992 AC113404.2-201ENST00000507884 177 ntBASIC15.47■□□□□ 0.07
ERCC1P07992 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.47■□□□□ 0.07
ERCC1P07992 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
ERCC1P07992 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.47■□□□□ 0.07
ERCC1P07992 TPSP2-201ENST00000561760 610 ntBASIC15.47■□□□□ 0.07
ERCC1P07992 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC1P07992 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.47■□□□□ 0.07
ERCC1P07992 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.47■□□□□ 0.07
ERCC1P07992 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC1P07992 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.47■□□□□ 0.07
ERCC1P07992 AL592071.1-201ENST00000611956 408 ntBASIC15.47■□□□□ 0.07
ERCC1P07992 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.47■□□□□ 0.07
ERCC1P07992 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC1P07992 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC1P07992 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.47■□□□□ 0.07
ERCC1P07992 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC1P07992 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.47■□□□□ 0.07
ERCC1P07992 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC1P07992 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.47■□□□□ 0.07
ERCC1P07992 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
ERCC1P07992 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC1P07992 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC1P07992 AL121761.2-201ENST00000598007 1648 ntBASIC15.46■□□□□ 0.07
ERCC1P07992 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ERCC1P07992 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.46■□□□□ 0.07
ERCC1P07992 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ERCC1P07992 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.46■□□□□ 0.07
ERCC1P07992 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ERCC1P07992 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.46■□□□□ 0.07
ERCC1P07992 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ERCC1P07992 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
ERCC1P07992 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.46■□□□□ 0.07
ERCC1P07992 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.07
ERCC1P07992 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ERCC1P07992 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
ERCC1P07992 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.46■□□□□ 0.07
ERCC1P07992 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.07
ERCC1P07992 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ERCC1P07992 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ERCC1P07992 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.46■□□□□ 0.07
ERCC1P07992 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms