Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.55■□□□□ 0.4
RETP07949 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RETP07949 MIR4745-201ENST00000577608 62 ntBASIC17.55■□□□□ 0.4
RETP07949 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.55■□□□□ 0.4
RETP07949 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RETP07949 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.55■□□□□ 0.4
RETP07949 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RETP07949 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RETP07949 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RETP07949 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
RETP07949 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.55■□□□□ 0.4
RETP07949 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.55■□□□□ 0.4
RETP07949 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.55■□□□□ 0.4
RETP07949 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RETP07949 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.55■□□□□ 0.4
RETP07949 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RETP07949 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.55■□□□□ 0.4
RETP07949 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RETP07949 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RETP07949 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RETP07949 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.55■□□□□ 0.4
RETP07949 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
RETP07949 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RETP07949 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RETP07949 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RETP07949 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RETP07949 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RETP07949 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RETP07949 MYLKP1-201ENST00000509077 1580 ntBASIC17.54■□□□□ 0.4
RETP07949 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RETP07949 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RETP07949 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.54■□□□□ 0.4
RETP07949 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.54■□□□□ 0.4
RETP07949 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RETP07949 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.54■□□□□ 0.4
RETP07949 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RETP07949 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RETP07949 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.54■□□□□ 0.4
RETP07949 ELK2BP-201ENST00000415014 1224 ntBASIC17.54■□□□□ 0.4
RETP07949 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.54■□□□□ 0.4
RETP07949 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.54■□□□□ 0.4
RETP07949 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RETP07949 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.54■□□□□ 0.4
RETP07949 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.54■□□□□ 0.4
RETP07949 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RETP07949 AC025678.2-201ENST00000562061 970 ntBASIC17.54■□□□□ 0.4
RETP07949 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.54■□□□□ 0.4
RETP07949 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.54■□□□□ 0.4
RETP07949 AC008667.4-201ENST00000607370 168 ntBASIC17.54■□□□□ 0.4
RETP07949 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.54■□□□□ 0.4
RETP07949 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
RETP07949 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.54■□□□□ 0.4
RETP07949 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
RETP07949 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.54■□□□□ 0.4
RETP07949 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RETP07949 GNAS-203ENST00000306120 1878 ntBASIC17.54■□□□□ 0.4
RETP07949 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.54■□□□□ 0.4
RETP07949 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RETP07949 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
RETP07949 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.54■□□□□ 0.4
RETP07949 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RETP07949 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RETP07949 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.53■□□□□ 0.4
RETP07949 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RETP07949 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RETP07949 AC006504.4-201ENST00000592118 1568 ntBASIC17.53■□□□□ 0.4
RETP07949 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RETP07949 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.53■□□□□ 0.4
RETP07949 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RETP07949 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RETP07949 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RETP07949 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
RETP07949 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.53■□□□□ 0.4
RETP07949 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RETP07949 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.53■□□□□ 0.4
RETP07949 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.53■□□□□ 0.4
RETP07949 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.53■□□□□ 0.4
RETP07949 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.53■□□□□ 0.4
RETP07949 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.53■□□□□ 0.4
RETP07949 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RETP07949 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.53■□□□□ 0.4
RETP07949 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RETP07949 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RETP07949 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RETP07949 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RETP07949 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.53■□□□□ 0.4
RETP07949 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
RETP07949 AC099343.3-201ENST00000605834 2503 ntBASIC17.53■□□□□ 0.4
RETP07949 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RETP07949 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.53■□□□□ 0.4
RETP07949 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RETP07949 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RETP07949 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RETP07949 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RETP07949 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
RETP07949 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RETP07949 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RETP07949 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RETP07949 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RETP07949 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms