Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
TCRAP04437 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TCRAP04437 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
TCRAP04437 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
TCRAP04437 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TCRAP04437 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
TCRAP04437 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC13.28□□□□□ -0.28
TCRAP04437 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TCRAP04437 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TCRAP04437 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TCRAP04437 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.28□□□□□ -0.28
TCRAP04437 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TCRAP04437 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TCRAP04437 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.28□□□□□ -0.28
TCRAP04437 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TCRAP04437 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TCRAP04437 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC13.28□□□□□ -0.28
TCRAP04437 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TCRAP04437 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TCRAP04437 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TCRAP04437 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
TCRAP04437 UBE2SP1-201ENST00000450587 669 ntBASIC13.28□□□□□ -0.28
TCRAP04437 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC13.28□□□□□ -0.28
TCRAP04437 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
TCRAP04437 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC13.28□□□□□ -0.28
TCRAP04437 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC13.28□□□□□ -0.28
TCRAP04437 AL512604.3-201ENST00000569583 964 ntBASIC13.28□□□□□ -0.28
TCRAP04437 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC13.28□□□□□ -0.28
TCRAP04437 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TCRAP04437 AP000525.1-201ENST00000608286 694 ntBASIC13.28□□□□□ -0.28
TCRAP04437 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC13.28□□□□□ -0.28
TCRAP04437 AC009154.2-201ENST00000621177 724 ntBASIC13.28□□□□□ -0.28
TCRAP04437 AL157888.1-201ENST00000631930 593 ntBASIC13.28□□□□□ -0.28
TCRAP04437 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TCRAP04437 AC092053.1-201ENST00000605787 1936 ntBASIC13.28□□□□□ -0.28
TCRAP04437 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
TCRAP04437 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
TCRAP04437 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TCRAP04437 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TCRAP04437 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.28□□□□□ -0.28
TCRAP04437 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
TCRAP04437 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC13.28□□□□□ -0.28
TCRAP04437 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
TCRAP04437 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TCRAP04437 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC13.28□□□□□ -0.28
TCRAP04437 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TCRAP04437 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TCRAP04437 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
TCRAP04437 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TCRAP04437 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.28□□□□□ -0.28
TCRAP04437 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TCRAP04437 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TCRAP04437 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TCRAP04437 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
TCRAP04437 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TCRAP04437 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TCRAP04437 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TCRAP04437 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.27□□□□□ -0.28
TCRAP04437 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TCRAP04437 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC13.27□□□□□ -0.29
TCRAP04437 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TCRAP04437 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
TCRAP04437 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TCRAP04437 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TCRAP04437 AL390955.1-201ENST00000428694 934 ntBASIC13.27□□□□□ -0.29
TCRAP04437 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TCRAP04437 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC13.27□□□□□ -0.29
TCRAP04437 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TCRAP04437 AC112698.1-201ENST00000510299 916 ntBASIC13.27□□□□□ -0.29
TCRAP04437 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC13.27□□□□□ -0.29
TCRAP04437 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TCRAP04437 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TCRAP04437 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TCRAP04437 AC024563.2-201ENST00000603282 481 ntBASIC13.27□□□□□ -0.29
TCRAP04437 ITM2C-210ENST00000620962 501 ntBASIC13.27□□□□□ -0.29
TCRAP04437 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
TCRAP04437 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TCRAP04437 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC13.27□□□□□ -0.29
TCRAP04437 AC078925.2-201ENST00000624013 1973 ntBASIC13.27□□□□□ -0.29
TCRAP04437 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TCRAP04437 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TCRAP04437 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC13.27□□□□□ -0.29
TCRAP04437 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC13.27□□□□□ -0.29
TCRAP04437 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TCRAP04437 RNF216P1-203ENST00000404404 2427 ntBASIC13.27□□□□□ -0.29
TCRAP04437 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
TCRAP04437 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TCRAP04437 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.27□□□□□ -0.29
TCRAP04437 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TCRAP04437 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TCRAP04437 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TCRAP04437 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TCRAP04437 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TCRAP04437 TSPY14P-201ENST00000303979 915 ntBASIC13.26□□□□□ -0.29
TCRAP04437 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TCRAP04437 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TCRAP04437 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TCRAP04437 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TCRAP04437 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TCRAP04437 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms